Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05594 ATGGCTGACGACTTCAATAAAGTCCCTCCTTCCTTCGATCGCATGCAGGATTCTGGTTCAAAAGGGTTCAACCCAGCATTAATTGTTCTCCTGGTTGTTGCTGGGTTGCTGTTGGTATTTCTCGTTGGAAACTATGTACTCTACTCATATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCAATCTCGAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGCATCTCTGCACCTGGAGAGTAG 249 0.4538 MADDFNKVPPSFDRMQDSGSKGFNPALIVLLVVAGLLLVFLVGNYVLYSYAQKTLPPRKKKPISKKKMKKERLKQGISAPGE. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05594 82 Pfam DNA binding protein S1FA 19 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Seca7g05594 82 PANTHER DNA-BINDING PROTEIN S1FA2 13 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Seca7g05594 82 MobiDBLite consensus disorder prediction 58 72 - -
Seca7g05594 82 MobiDBLite consensus disorder prediction 55 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05594 Seca-Chr7 154871902 154874119 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Seca7g05594 S1FA 5.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05594 - - gmx:100499820 122.479