Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05592 ATGAGCGTCATCGACATTCTAACCAGAGTCGATACCATTTGCAAGAAGTACGACAAATACGATGTCGAAAAGCACAAGGATTCCAATCTCGCCGGCGACGATGCCTTTGCCAGACTCTACGCCAGTGTCGACGCCGACATTGAGGCCCTGCTTCAGAAAGCAGAAACCGCTTCCAAGGATAAAGGTAGGGCTTCTGCTGTAGCGATCAATGCGGAGATTCGTCGTACCAAGGCTCGGTTGCTGGAGGAGGTCCCCAAATTACAGAAGTTGGCTATGAAAAAGGTAAAGGGGCTTTCATCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCAGACAGAATCCAAGCTATCCCAGATGGGACTCCTGCTGCACCAAAACAAACTGGAGGCTGGGCAACTTCTGCCTCACGTGCTGAAATTAAATTTGATTCGGATGGGAGATTTGATGATGAATACTTCCAACAAACTGAGGAGTCAAGTCGATTCAGGCAGGAATATGAAATGCGTAGAATAAAACAGGATCAAGGTTTGGATATGATTGCAGAAGGATTGGATACATTGAAAAACATGGCATCTGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTCAAGAATACCAATGTTAGACTTAGAGACACAGTAACCCAGCTTCGATCCAGTCGAAACTTTTGCATCGATATTGTTTTATTGATTATAATTCTGGGAATTGCTGCCTACTTATACAAGTAA 786 0.4466 MSVIDILTRVDTICKKYDKYDVEKHKDSNLAGDDAFARLYASVDADIEALLQKAETASKDKGRASAVAINAEIRRTKARLLEEVPKLQKLAMKKVKGLSSQEFAARNDLVLALPDRIQAIPDGTPAAPKQTGGWATSASRAEIKFDSDGRFDDEYFQQTEESSRFRQEYEMRRIKQDQGLDMIAEGLDTLKNMASDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLRDTVTQLRSSRNFCIDIVLLIIILGIAAYLYK. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05592 261 Pfam SNARE domain 207 256 IPR000727 -
Seca7g05592 261 Gene3D - 170 231 - -
Seca7g05592 261 SMART tSNARE_6 165 232 IPR000727 -
Seca7g05592 261 ProSitePatterns Syntaxin / epimorphin family signature. 176 215 IPR006012 GO:0005484|GO:0006886|GO:0016020
Seca7g05592 261 SUPERFAMILY SNARE fusion complex 164 230 - -
Seca7g05592 261 PANTHER SYNTAXIN 45 252 IPR045242 -
Seca7g05592 261 CDD SNARE_Qc 175 230 - -
Seca7g05592 261 FunFam Putative syntaxin-71-like 170 231 - -
Seca7g05592 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05592 Seca-Chr7 154847256 154850267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05592 1 260 SNARE and Associated Proteins AT3G09740 75.954 6.54e-151 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05592 K08506 - gmx:100819272 442.195