Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05585 ATGAAGTTTTCCCTTTTCGGTTGTTTCTCTGCATCGACCATAGACAAAAACAACAACGCAGACTATGCAGAAGGAGAGAATGATGGAGGCTTTCGTGTATTCACATATAACCAATTGAAATCAGCCACTGGTAATTTTAATGAGAAGATTGGAGAAGGTGGATTTGGCTCTGTTTATAAGGGTAAGCTTAGAGATGGCACTTTTGTAGCAGTGAAAGTGCTTTCCATTGAGCTCGAATCCATGCGAGGAGAGAGGGAATTCGTTGCAGAATTAGCAACTCTCGCAAATATCAAGCACCAAAATCTAGCCAGCCTTCAAGGGTGTTGTGTGGAAGGTGCACACAGATACTTGGTCTATGATTACATGGAGAACAACACACTCTACCACGCTTTCTTAGGTTCGGAGGAAAGAAGGATGAGATTCAGTTGGGAAACAAGGAAGGACATATCCATAGGTGTGGCCCGGGGGCTTGTTGTTCTCCATGAGGAGTTGAGGCCCCATATCGTACATAGAGACATCAAAGCCAAAAATATACTTCTTGATCAGAATTTCACACCTAAAGTTTCAGACTTTGGTTTGGCAAAATTACTCAGAGATGAAAAATCTCACATCAGTACTCAAGTTGCAGGGACATTGGGTTATTTGGCTCCAGAGTATGCCAATTCTGGAAGGTTGACACGAAAATCAGATGTTTATAGCTTCGGAGTGTTACTTTTACAGATTATCAGTGGCCTAGCAGTTGTAGATGCTTATCAAGATATTGAGCGGTTCATTGTAGAGAAGGCGTGGGCAGCTTATAAGACTAATGATCTATTAAGAATGGTTGATCCTGTGCTTAATATGAACTTTCCTATGGAAGAAGCTATAAAATTCCTAAAGGTGGGGCTGCTTTGCGTGCAAGAAACAGCAAAGCTTCGGCCACGAATGTCAGAGGTTGTGGAAAAGTTGACCAATAAAATTGATATGAAAGACGTTCACATTGCAAAACCAGGATTTGTTGCTGACCTCAGGAACATCAAAATCAAACAAGCATCAGTACACTCACCACAGGAATCAAGTTCAGCTGGAGCAAGCTTTGGAAGCTCCATTTGGAGTATGGCCAATCTTGCTCGTTAA 1116 0.4194 MKFSLFGCFSASTIDKNNNADYAEGENDGGFRVFTYNQLKSATGNFNEKIGEGGFGSVYKGKLRDGTFVAVKVLSIELESMRGEREFVAELATLANIKHQNLASLQGCCVEGAHRYLVYDYMENNTLYHAFLGSEERRMRFSWETRKDISIGVARGLVVLHEELRPHIVHRDIKAKNILLDQNFTPKVSDFGLAKLLRDEKSHISTQVAGTLGYLAPEYANSGRLTRKSDVYSFGVLLLQIISGLAVVDAYQDIERFIVEKAWAAYKTNDLLRMVDPVLNMNFPMEEAIKFLKVGLLCVQETAKLRPRMSEVVEKLTNKIDMKDVHIAKPGFVADLRNIKIKQASVHSPQESSSAGASFGSSIWSMANLAR. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05585 371 SUPERFAMILY Protein kinase-like (PK-like) 29 324 IPR011009 -
Seca7g05585 371 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05585 371 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Seca7g05585 371 FunFam serine/threonine-protein kinase PBS1-like 12 121 - -
Seca7g05585 371 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Seca7g05585 371 CDD STKc_IRAK 50 318 - -
Seca7g05585 371 Pfam Protein kinase domain 47 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05585 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Seca7g05585 371 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 352 - -
Seca7g05585 371 SMART serkin_6 44 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05585 371 Gene3D Transferase(Phosphotransferase) domain 1 122 330 - -
Seca7g05585 371 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05585 Seca-Chr7 154785488 154787199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05585 3 362 Receptor kinase-like Gene Family AT1G07650 45.753 7.60e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca7g05585 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05585 - - gmx:100813945 598.586