Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05582 ATGGCATCCAACAGGGGTCAAGGTGGAATTCAGCAGTTGTTGGCTGCTGAACAAGAAGCACAAAGGATTGTAAATGCTGCAAAAGCTGAAAAATTGGCTAGGTTGAAACAGGCCAAGGAAGAGGCTGAAAAGGAGGTTGCTGAATACCGGGCTAAGCTAGAGCTTGAGTTTCAAAAGAAAGTTTCAGATAGTAGCGGAGATTCTGGAGCTAATGTCAAGCGACTTGAGGTAGAGACTGAAGCAAAAATCCATCACCTGAAAAAGGAGGCTGCAAGGATATCGGATGATGTTGTCGCCATGCTCCTTAAGTACGTAACTAGTGTGAAAAATTAG 333 0.4414 MASNRGQGGIQQLLAAEQEAQRIVNAAKAEKLARLKQAKEEAEKEVAEYRAKLELEFQKKVSDSSGDSGANVKRLEVETEAKIHHLKKEAARISDDVVAMLLKYVTSVKN. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05582 110 Coils Coil 10 59 - -
Seca7g05582 110 NCBIfam V-type ATPase subunit G 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca7g05582 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca7g05582 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca7g05582 110 FunFam V-type proton ATPase subunit G 3 110 - -
Seca7g05582 110 Gene3D - 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05582 Seca-Chr7 154728178 154731591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05582 1 110 Primary Pumps ATPases(2) AT3G01390 72.727 8.21e-44 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05582 K02152 - gmx:100306550 158.688