Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05546 ATGAAGTCAAGATTTTTGAGAGGGTGTCTTAACAAGTGCAAGAAAATGGGGAGTAGAGTCAAAACTTGTGCTGCTTGTGAGTACTGTTGTCAATGGGTTTTGTGGTCTTCCCTACATGAGAGTTGCTCCATTCCAAGTGATGTTCCAAAAGGTCACATGGTTGTCTATGTTGGAGAGAATCACAAGAGATATGTGATCAAGATTGCATTGCTTCAAGATCCACTCTTCAGGGCCCTTCTGGATCAAGCTCAAGAAGAGTATGATTTCATTGCAGATTCAAGACTCTGCATTCCTTGCGATGAGAATCTCTTCCTCAATGTCCTTCGCTGCGCAACCTCCTCACAGAACCAACGGGCATGTCCGTGTCTTTAA 372 0.4382 MKSRFLRGCLNKCKKMGSRVKTCAACEYCCQWVLWSSLHESCSIPSDVPKGHMVVYVGENHKRYVIKIALLQDPLFRALLDQAQEEYDFIADSRLCIPCDENLFLNVLRCATSSQNQRACPCL. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05546 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 106 IPR003676 GO:0009733
Seca7g05546 123 Pfam Auxin responsive protein 37 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05546 Seca-Chr7 154214315 154214686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05546 10 121 Calmodulin-binding Proteins AT4G34750 41.026 1.08e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05546 K14488 - gmx:100812927 206.453