Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05538 ATGGCTTCAGAAGTAGTAGCCATCCACACCTTTTCTCAATCAGACACTAAACCCTCCATCACTCCCACCGCAACCACCACCGTCTCCGACCCCAATGCGCAACTCGCCGTCGCCAGAAGATCCTCCAACACCGCCCGCTCCACCAAGGACCGCCACACCAAGGTTAACGGCCGCGGCCGCCGAGTCCGCATGCCGCCCCTCTGCGCCGCCAGAATATTCCAGCTCACGCGCGAGCTCGGCCACCGCTCCGACGGCGAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCCATCATCGCTGCCACCGGCACCGGCACTGTCCCCGCCGCTCCCGTCTCCACCGTCTCCCCCTCTGCCTCCTCCTCCGCGCCCTCCGTCCCCTGCCGCGTCCAGCCCATCTCGACACCCGGCGCCGCCCAGGGCATGTTCGCCGTCGCTATGCCGCAGCCGAATTGCCGGCTGGACCTCTGCCAGCCGGCGGTAATGGAGTACTCCGCGGCGACGGCAGTGAACGGGTACCGGCACATGCCGTTCACGGCGCTGCTGTTGCAGCCGACGACGGCGGAGGAGAATCAGCAAGAGGAGACTCTGAGCGAACAATGA 606 0.6667 MASEVVAIHTFSQSDTKPSITPTATTTVSDPNAQLAVARRSSNTARSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPVSTVSPSASSSAPSVPCRVQPISTPGAAQGMFAVAMPQPNCRLDLCQPAVMEYSAATAVNGYRHMPFTALLLQPTTAEENQQEETLSEQ. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05538 201 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 128 IPR005333 GO:0003700
Seca7g05538 201 MobiDBLite consensus disorder prediction 9 28 - -
Seca7g05538 201 Pfam TCP family transcription factor 47 124 IPR017887 -
Seca7g05538 201 ProSiteProfiles TCP domain profile. 48 102 IPR017887 -
Seca7g05538 201 MobiDBLite consensus disorder prediction 37 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05538 Seca-Chr7 154136673 154137278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05538 48 188 TCP Transcription Factor Family AT2G37000 58.156 6.24e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Seca7g05538 TCP 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05538 - - cam:101510590 256.529