Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05537 ATGGAAGACACGGGTAATAGGGTTAATGAGGGTGAAGCTGAAGATGCAAATAATTTGAAGTCCCCTGATGAAGAAAATGCTTGTTCTGTTGAGGATGTTACTGATGTATACAAAAGGATTTCTGAGTTAACTGATGATGACATTAGAATCCTTGAGTTCGATTCTGAACTGGATGGGTATAATTTTTATTCTGAGTATGCTAAATTCAAAGGTTTTGCGGTTAGGAAAGATGATGTTTATCGTTATCGTAATAGGTTAATTACCATGAGGCAATTAGTTTGTAACAGACAGGGGGAAAGGAGTGAGAAGCATTTAAATAGGGCTGACAGAATTAGGGAAGCTAAGGCAATTACTCGTACCAATTGTCATGCAAGGCTTCGACTGTATTTTGATAAAAACAGTGGGAAGTGGAAGGTTGGAATTTTTGAGCCAGAACACAATCATGAGCTTACTCCTTCAAATATGGTTCATTTGATGCCTGCATATAGTGGGTTGAGTGCTGCTGATAAGGCACAAGTAAATAGTCTTCACTTATATGGTGTTAGCACTTGTCATATAATGGGTTTAATAATGGGTCAGAAAGGTGGTCACTCAGATTTGGGTTTTTGTAAGAAGGACTTGTACAATCACATTGACAAGGAAAATAGGGCCAAAATACAGGATGGAGATGCTTTTGCTGCTTTGTGCTATCTTCAAGCTAAGTTTGATAGTAATCCAATGACATTCGTTAAGTTCACTACTACTGAAGATGATAGGCTTGAAAACTTGTTCTGGGCTGATGTAGGAAGTAGAATTGATTATGCTTGTTTTGGTGATGTAGTCGCATTTGACACAACTTATAAAAAAAACAAGTATAACAGGCCTTTAGTAATTTTTTGTGGTTATAATCATCATGGGGAAACCACAATTTTTGGTTGTGCTCTTGTGTCTGATGAGAAGACAGAAACTTATAAATGGGTACTTGAATCTTTTCTGGAAGCTATGTTTAATAAATTTCCTAAGGCAGTTGTTACAGACGGGGATGGTGCAATGCGTGAAGCTATAAGATCTGTGTTTCCAGATTCTATCCACAGGTTGTGTTCATGGCATCTTCACCAGAATGCTTGTGAGAATGTCAAGAATCCCAAATTTTTGGAAGATTTTAAGAAGTTAATTTATGCCAATTATACTCCTGAGAAATTTGAGCAACAGTGGGTACAAGTCATTGAGAAACATGGTCTGAGCAACAATAGGTGGGTGCTGAAGGTGTATGACCTCAAGAGAATGTGGGCTACCGCTTTTTTCAGAGATAACTTTTTTGCTGGTGTCCGGACTACCTCCATTTGTGAAGGTATTAATTCTTTTATCAAGAGATATGTACAGAGTAAAAACAGTCTCGTTGATTTTCTACACAATTTTGAAAGAGCTTTGAATGAATATAGGCACAATGAATTAGCTTCTGATTTTAAATCCTCATACACCCAGCCAGTTCTGACAACTGCTTTGAAAAAGTATGAAGTTAATGCGTGTAATGTTTACACCAGGAATAAGTTTTTTGAAATTAGAAAGCAAATTGAGAAAGTTGTTGCTTTGAATATGATTGAAAGGACTGAGGTAGGTAATGTTGTCACATTGAAGATGAATAAATTTGGAAGTCCTGATTCTGTATACCTTGTTTTGTTTGATAAGTCTGTTGGTAAGTTTGTATGTGATTGTCGGTTGTTTGAGTCATGTGGTTTACCATGTTCACATATCTTTTGTGCTATGAAGCATGAGCAAATAGAGTCAATTCCTCCTTCACTCATCTGCAAAAGGTGGACTAAGTTTGCTAAGGTTGATTATATTTCTGCAATTTATGCTGATGAGGGTGATACTACAAAGAAGGAAGTGTTGAGGTCCGGTGCTGTGGGTGCTGCTTGTAATAGGCTTAACAAGGCTGCACATAAAGATCCTCATAATTTTGTGAAAAACATTGAGGCCATCCATCAATTAGCAGACCAGATGGAAAGGCAAGATGGGGTTGATGTCAACATTGCTGACATATCAAGGGTTGTCCGTGATCCAACTATTGTTAAAACCAAAGGTGCACCCCCGTAA 2076 0.3757 MEDTGNRVNEGEAEDANNLKSPDEENACSVEDVTDVYKRISELTDDDIRILEFDSELDGYNFYSEYAKFKGFAVRKDDVYRYRNRLITMRQLVCNRQGERSEKHLNRADRIREAKAITRTNCHARLRLYFDKNSGKWKVGIFEPEHNHELTPSNMVHLMPAYSGLSAADKAQVNSLHLYGVSTCHIMGLIMGQKGGHSDLGFCKKDLYNHIDKENRAKIQDGDAFAALCYLQAKFDSNPMTFVKFTTTEDDRLENLFWADVGSRIDYACFGDVVAFDTTYKKNKYNRPLVIFCGYNHHGETTIFGCALVSDEKTETYKWVLESFLEAMFNKFPKAVVTDGDGAMREAIRSVFPDSIHRLCSWHLHQNACENVKNPKFLEDFKKLIYANYTPEKFEQQWVQVIEKHGLSNNRWVLKVYDLKRMWATAFFRDNFFAGVRTTSICEGINSFIKRYVQSKNSLVDFLHNFERALNEYRHNELASDFKSSYTQPVLTTALKKYEVNACNVYTRNKFFEIRKQIEKVVALNMIERTEVGNVVTLKMNKFGSPDSVYLVLFDKSVGKFVCDCRLFESCGLPCSHIFCAMKHEQIESIPPSLICKRWTKFAKVDYISAIYADEGDTTKKEVLRSGAVGAACNRLNKAAHKDPHNFVKNIEAIHQLADQMERQDGVDVNIADISRVVRDPTIVKTKGAPP. 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05537 691 SMART 26again6 561 588 IPR006564 GO:0008270
Seca7g05537 691 MobiDBLite consensus disorder prediction 1 25 - -
Seca7g05537 691 Pfam MULE transposase domain 273 367 IPR018289 -
Seca7g05537 691 PANTHER OS01G0519700 PROTEIN 51 623 - -
Seca7g05537 691 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Seca7g05537 691 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05537 Seca-Chr7 154129910 154131985 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g05537 MULE 2.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05537 - - tpra:123910662 760.37