Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05509 ATGTTTAGGTCTTTTGCTGGGAAGATACATAAGGGTCTTTCACTCTGTGTACACAGAAGACCGGCACTCAGCTACTTCCATGAAGAGGTAGTGGCAGATGAAGTTAGGAAAGGATATTTTGCTGTTGTTGCAATGAAGGATGGAGAAACCAAAAGGTTCGTTGTTAAATTGGACTACTTGAATGATCCAGCATTCATAAGACTGCTAGACCAAGCTAGGGAAGAGTATGGTTTCATACAAAAGGGAACTCTTGCTGTTCCATGTCTTCCTCGAGATTTACAGAACATTCTAGACGCTCGGAGATCATAG 309 0.4207 MFRSFAGKIHKGLSLCVHRRPALSYFHEEVVADEVRKGYFAVVAMKDGETKRFVVKLDYLNDPAFIRLLDQAREEYGFIQKGTLAVPCLPRDLQNILDARRS. 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05509 102 Pfam Auxin responsive protein 30 97 IPR003676 GO:0009733
Seca7g05509 102 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05509 Seca-Chr7 153923251 153923559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05509 43 88 Calmodulin-binding Proteins AT4G34750 53.191 3.44e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05509 - K14488 gmx:106795483 134.42