Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05506 ATGTTTAGGTCATTCGCTGGGAAAATACAAAAGGGTCTTTCACACTTTGTACACAGAAGGCCCCCACTGAGCTACTTCAATGAAGAGTACTTAGTGGAAGTAGTGGCTGATGATGTTAGAAAAGGATATTTTGCTGTTGTTGCAATGAAGGATGGGGAAACCAAAAGGTTCGTTGTTAAATTGGACTACCTGGCTGATCCTGCATTCATAAGACTGCTAGACCAAGCTCGGGAAGAGTATGGTTTCATACAGAAGGGAACTCTTGCTGTTCCTTGTCTGCCTCGAGATTTACAAAGGCCTACTACTACACTCAGCTACTTCCATGAAGACTACTTAGCCGAAGCTACCAGAGATGATGTTATTAGGAAAGGATATTTTGCTGTTGTTGCAACAAAGGATGGAGATACCAAAAGGTTCATCGTTAAATTAGACTACTTGGCTGATCCTGCTTTCATAAGACTGCTGGACAAAGCTCGGGAAGAATATGGTTTCATGCACAAGGGAACTCTTTCAGTTCCATGTCTGCCTCAAGATTTACAGAACATTCTAGATGCTGCAGGGAGATCGAGGAAATTAGAAGCACTGAGCAGCAGCTTCAATGAAGATAGGGGAATGGAGGTGCCTGAACGTGATGTAATGGAAGGACATTTTGTAGTTTTTGCTAACAAGGATCAACTAACCAAACGGTTTGTTGTTGATTTGCACTATTTGAGTGACCCTGTTTTTTTGGGACTGCTGGAACGGGCAAAAGAAGAGTATGGCTTCAAACAGAGAGGGCCTCTGAAGATGTTTAGGTCCTTCGCGGGGAAGATACAAAACGGTATTTCACTCTTTGTACACAAAAGTAGGCCTCCTACTACACTCAGCTACTTCCATGAAGACTACTTATCCGAAGCTACAAGAGATGATGTTAGGAAGGGATATTTTGCTGTTCTTGCAACAAAAGATGGAGATACCAAAAAGTTTGTTGTTAAATTAGACTACCTGGCTGATCCTGCATTCATAAGATTGCTGGATCAAGCTCGGGAAGAGTACGGTTTCATACAAAAGGGAACTCTTGCTGTTCCATGTCTGCCTCGAGATTTACAGAACATTCTAGACGCTCGGAGATCATAG 1116 0.4256 MFRSFAGKIQKGLSHFVHRRPPLSYFNEEYLVEVVADDVRKGYFAVVAMKDGETKRFVVKLDYLADPAFIRLLDQAREEYGFIQKGTLAVPCLPRDLQRPTTTLSYFHEDYLAEATRDDVIRKGYFAVVATKDGDTKRFIVKLDYLADPAFIRLLDKAREEYGFMHKGTLSVPCLPQDLQNILDAAGRSRKLEALSSSFNEDRGMEVPERDVMEGHFVVFANKDQLTKRFVVDLHYLSDPVFLGLLERAKEEYGFKQRGPLKMFRSFAGKIQNGISLFVHKSRPPTTLSYFHEDYLSEATRDDVRKGYFAVLATKDGDTKKFVVKLDYLADPAFIRLLDQAREEYGFIQKGTLAVPCLPRDLQNILDARRS. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05506 371 Pfam Auxin responsive protein 299 366 IPR003676 GO:0009733
Seca7g05506 371 Pfam Auxin responsive protein 207 262 IPR003676 GO:0009733
Seca7g05506 371 Pfam Auxin responsive protein 115 184 IPR003676 GO:0009733
Seca7g05506 371 Pfam Auxin responsive protein 35 96 IPR003676 GO:0009733
Seca7g05506 371 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05506 Seca-Chr7 153882403 153912043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05506 37 92 Calmodulin-binding Proteins AT4G34750 44.643 2.52e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05506 - K14488 gmx:100775971 138.658