Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05505 ATGATGGTTTGGTCTTTCTTAGGCAAGATACACTACGGAGGTTTCTCAGTATTCTTTGCACAGAGGAAATTAGAAGCACTGAGCAGCAGCTTCAATGAAGATAGGGGAATGGAGGTGCCTACAGGTGATGTAATGGAAGGACATTTTGTAGTTTTTGCTAACAAGGATCAACTAACCAAACGGTTTGTTGTTGATTTGCACTATTTGAGTGACCCTGCTTTTCTGGGACTGCTGGAACGGGCAAAAGAAGAGTATGGCTTCAAACAGAAGGGGGCTTTGCTAATTCCTTGCCATCCTCAAGAACTAGAGAACATTCTAGCTAGAAGAAAGACGTAG 336 0.4286 MMVWSFLGKIHYGGFSVFFAQRKLEALSSSFNEDRGMEVPTGDVMEGHFVVFANKDQLTKRFVVDLHYLSDPAFLGLLERAKEEYGFKQKGALLIPCHPQELENILARRKT. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05505 111 Pfam Auxin responsive protein 38 107 IPR003676 GO:0009733
Seca7g05505 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05505 Seca-Chr7 153875772 153876107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05505 40 107 Calmodulin-binding Proteins AT4G34750 41.176 8.06e-11 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05505 - K14488 gmx:100809715 138.658