Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05504 ATGCTTATTAGGTCTTTTGTTGGGAGGATACAAAAGGGTCTCTCACTGTGGCCTGCACGCAGCTACTTCAATAAACATCATGCCACAACTGCTGTGCCAGATGATGTTATGGAAGGATATTTTGCTGTTCTTGCAATCAATGGTGATGAAACCAGAAGGTTTATTGTTGGGTTAGACTATTTGACTGATCCTGCATTTTTGGGATTACTTGATCAAGCTCAAGAAGAGTATGGTTTCAGACAGCAGGGAACCCTTGCTGTCCCTTGTCGACCTCAAGAATTACAGAAGATTCTAGATGGTCGGAAAGCATAG 312 0.4263 MLIRSFVGRIQKGLSLWPARSYFNKHHATTAVPDDVMEGYFAVLAINGDETRRFIVGLDYLTDPAFLGLLDQAQEEYGFRQQGTLAVPCRPQELQKILDGRKA. 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05504 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 97 IPR003676 GO:0009733
Seca7g05504 103 Pfam Auxin responsive protein 28 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05504 Seca-Chr7 153870642 153870953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05504 33 98 Calmodulin-binding Proteins AT3G43120 42.424 4.40e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05504 - K14488 gmx:100818734 155.221