Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05493 ATGGCGAAATCCTTTGACCCCAAAACGATGACGTATTCCTCACCCCGGCCACCCATCCGCATTCCCACCGACCCCTACCTCTCCCTAACATCCTTCCTCTTCCAAAGCACCACCTCCGTCGCCAACACCCTCGCCCTCGCCGACGCCCATTCCGGCGACTACCTCACCTTCCGCCAGCTTAAAACCCATGTCTCCGCCCTCTCTCGCTCCTTGCTTCGCCTCGGAATCCGACGAGGCGATGTCGTTTTACTATTCGCACCCAACTCTATACGCTTCCCTGTCTGCTTCCTTGCCGTCGTTGCCATCGGCGCCATCGCCACCACCTGCAGCCCCTTATACACACTCTCCGAACTCTCCACACAAGTTCACGACTCCAACTCCAAGCTTGTCATCACTGTTTCAGAACTCTTCCACAAAATCGAAGCCTTAAATTTACCCTCCATAATGCTGGATGGTCCATCGAGCCACGTAAATTTATCGAGTAAGCCTGGTTCTAGGATCTGGTACTATGTGGATTTGATCGGAGAGTCGGAAGGGAGCTCCGACGAGGTTCCGGTGGACGGCGTTGTTTCACAGTCCGACGTGGCGGCGCTTCTGTACTCTTCCGGCACCACGGGGAGGAGCAAGGGAGTAGTGCTGACTCACCGGAATTTCATCGCGGCGGCGATGGTGACGACGGTGGATCAAGACCTTTACTGCGAGGGAAAGAACGTTTTCTTGTGCTTGGTGCCCATGCACCACGTGTTGGGGCTGTCGGTGATAACGTACGGGCAGCTGCGGAGGGGGAACGCGGTGGTGTCGATGGTGAGGTTTGATCTGGAGAAGGTTCTGGCGGCGGTGGAGAAGTTCCGGGTAACGTATTTGTACGTTGCTCCGCCCGTGATGGTGGAGCTGGCGAAACGACGTGGTGTGGTGAAGGCGTACGACTTGTCGTCCCTGAAACAGCTCGCAGGTGGTGCTGCACCTTTGGGTAAAGACGTGATGCAGGAATTTGCTAAGATTCTACCCCACGTTGAAATCGTTCAGGGGTATGGCATGACGGAAGCATGTGGACCTATTTCTATAGAAGATGCAAAGGAGGGATGTCGCCTTTCAGGTTCAACTGGAAAGCTAATTTCATGTTTAGAATCCCGAATAGTTAGTTTAGAAACATCGAGGCCCCTTCCACCAAATCAATTAGGGGAAATTTGGCTTCGAGGACCTACTATGATGCAAGGATATTTTAACAATCCAGAGGCAACAAAACTGACCATTGATGATCAAGGTTGGATGCATACAGGAGATCTTGGATATTTTGATGAAGAGGAACAGCTATTTGTTGTGGATAGAATAAAAGAGCTCATTAAGTGTAGTGGATATCAGGTTGCGCCAGCAGAACTTGAAGACTTGCTGGTTTCTCACCCTGAAATTTCTGATGCTGGGGTGATCCCATCCCCCGATGCTAGAGCTGGCCAGGTTCCAGTTGCTTTTGTCGTTCGCTCACCAAATAGCATGATAACAGCAGAAGATATTCAGAAGTTTGTAGCAAAACAGGTTGCACCATACAAAAGGTTGCGGCGGGTGACTTTTATAGAGAAGATTCCAAAGTCAGCCACAGGAAAAATCTTAAGAAAGGATCTCATAAGTTTTGATCAACAAAAGACATCAAAGTTATAG 1656 0.506 MAKSFDPKTMTYSSPRPPIRIPTDPYLSLTSFLFQSTTSVANTLALADAHSGDYLTFRQLKTHVSALSRSLLRLGIRRGDVVLLFAPNSIRFPVCFLAVVAIGAIATTCSPLYTLSELSTQVHDSNSKLVITVSELFHKIEALNLPSIMLDGPSSHVNLSSKPGSRIWYYVDLIGESEGSSDEVPVDGVVSQSDVAALLYSSGTTGRSKGVVLTHRNFIAAAMVTTVDQDLYCEGKNVFLCLVPMHHVLGLSVITYGQLRRGNAVVSMVRFDLEKVLAAVEKFRVTYLYVAPPVMVELAKRRGVVKAYDLSSLKQLAGGAAPLGKDVMQEFAKILPHVEIVQGYGMTEACGPISIEDAKEGCRLSGSTGKLISCLESRIVSLETSRPLPPNQLGEIWLRGPTMMQGYFNNPEATKLTIDDQGWMHTGDLGYFDEEEQLFVVDRIKELIKCSGYQVAPAELEDLLVSHPEISDAGVIPSPDARAGQVPVAFVVRSPNSMITAEDIQKFVAKQVAPYKRLRRVTFIEKIPKSATGKILRKDLISFDQQKTSKL. 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05493 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 541 - -
Seca7g05493 551 SUPERFAMILY Acetyl-CoA synthetase-like 19 546 - -
Seca7g05493 551 CDD 4CL 21 540 - -
Seca7g05493 551 Gene3D - 446 548 IPR045851 -
Seca7g05493 551 Pfam AMP-binding enzyme 42 450 IPR000873 -
Seca7g05493 551 FunFam 4-coumarate--CoA ligase 2 446 547 - -
Seca7g05493 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 445 - -
Seca7g05493 551 Gene3D - 10 445 IPR042099 -
Seca7g05493 551 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Seca7g05493 551 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05493 Seca-Chr7 153722171 153729662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05493 1 551 Monolignol Biosynthesis Gene Families AT4G05160 58.258 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05493 K01904 - psat:127097095 804.668