Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05478 ATGAATACCTTCTTCTACCATGTCCTTTCTGGCAGGTGGTTCATGGTCTTCGCCTCTTGTCTAATCATGGCCGTTTCAGGATCAACCTACATATTTAGTCTGTACTCAAACGAAGTGAAAACCTCTTTGGGTTACGACCAATCCACTCTGAACTTGATTAGCTTCTTCAAAGACCTTGGTGCCAATGTTGGAATCATCTCAGGCTTAATCAGTGAGATAAGCCCTCCCTGGGTAGTACTAGCCATAGGGGCCACTATGAACTTCTTGGGATACTTCATGATATGGCTTTCTCTTACTCAACGCATTGCCAAACCCCAAGTTTGGCAAATGTGTCTCTATTTTTACATCGGTGCTAATTCAATGCCTTTTGCCAATACTGGTGCCTTGGTCTCCTGTGTCAAAAGCTTCCCACAAAACCGTGGCAGTGTCATTGGGTTGCTAAAGGGTTATATGGGTCTTAGTGGTGCCATTTTAACTCAGCTCTACCATGCCTTCTTTGGTCATGACAATCTCAAAGCTCTTATCTTTCTCATTGGTTGGTTTCCTTCTGCCATTTCCTTCATCTTCCTTCCATCAGCTCGGGTATTGAACCCAATCCCACAACCACAACACAAGGAGCTCAAGGTCTTTTACAAATTTCTATATACTTCACTTGGTCTTGCAGGGTTTCTCATGGTGTTGATCATCCTACAGAAGAAGTTCAGTTTTACAAGGATTGAGTATGCAATGGATGGCATGGTGGTTCTTTTCTTACTTTTTCTCCCACTTGCTGTGGTGTTTGAAGAGGAGTTCAAACTCTGGAAGACTCAAAACCAAACCTTCACAGATGCTTCCCCTTCAAGTGTGGAATTGCAATTGCAATCACAGGAAAATAGGAAAGTTCCTTGTTTGAGCAACATACTCAAACCACCAAACAGGGGTGAGGACCACACCATCTTACAAGCTCTGTTGAGTATTGACATGTTGGTTCTGTTACTAGCAGCAATGCTTGGTATTGGAGGAACACTAACTGCACTTGACAATTTAGGACAGATTGGGAACTCATTGGGGTACCCGAGAAAGAGCCTCACCATTTTTGTGTCCCTTGTGAGTATATGGAACTATCTTGGAAGAGTAGTGTGTGGTTATGCCTCTGAAATCTTGTTGACCAAATATAAATTCCCTCGTCCCTTGATGTTCACAATAGTTATGCTTCTCTCTTGTGTTGGTCATCTTCTAATAGCTTTTGGCATCCCAAACTCCCTCTACTTTGCTTCAGTGATGACTGGGTTTTGCTTTGGCTCTGTGTGGCCGTTAATGTTTTCCATCATATCTGAATTATTTGGCCTCAAACACTACTCTATGTTGCTCAATTTTGGAGTCACGGCAAGCCCTCTTGGGTCTTACATACTGAACGTGAGAGTCACTGGTTATTTGTATGATAAGGAGGCTATGAAACAATTGGGGATGAAGGGACTCACAAGACAAGCAGGGAAGGAGTTAAGTTGCTTGGGAGTAGAGTGTTATAGGAAGGCTTTTATCATAATCACAGTTTCAACTTTGGTTGGATGTTTTGTTTCTTTTATTTTGGTGTTAAGGACTAGAGAATATTACAAAGGTGACATTTATAAAAACTTCAGGGGGGAACCACAGATAACAGAGACTTTTGCAACATTAAGCAGTACTAATGCCAGCCACCACGAACCGCATGGAAGAACCAGATAA 1704 0.4231 MNTFFYHVLSGRWFMVFASCLIMAVSGSTYIFSLYSNEVKTSLGYDQSTLNLISFFKDLGANVGIISGLISEISPPWVVLAIGATMNFLGYFMIWLSLTQRIAKPQVWQMCLYFYIGANSMPFANTGALVSCVKSFPQNRGSVIGLLKGYMGLSGAILTQLYHAFFGHDNLKALIFLIGWFPSAISFIFLPSARVLNPIPQPQHKELKVFYKFLYTSLGLAGFLMVLIILQKKFSFTRIEYAMDGMVVLFLLFLPLAVVFEEEFKLWKTQNQTFTDASPSSVELQLQSQENRKVPCLSNILKPPNRGEDHTILQALLSIDMLVLLLAAMLGIGGTLTALDNLGQIGNSLGYPRKSLTIFVSLVSIWNYLGRVVCGYASEILLTKYKFPRPLMFTIVMLLSCVGHLLIAFGIPNSLYFASVMTGFCFGSVWPLMFSIISELFGLKHYSMLLNFGVTASPLGSYILNVRVTGYLYDKEAMKQLGMKGLTRQAGKELSCLGVECYRKAFIIITVSTLVGCFVSFILVLRTREYYKGDIYKNFRGEPQITETFATLSSTNASHHEPHGRTR. 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05478 567 Gene3D MFS general substrate transporter like domains 316 532 IPR036259 -
Seca7g05478 567 Pfam Nodulin-like 12 260 IPR010658 -
Seca7g05478 567 CDD MFS_Mch1p_like 11 517 - -
Seca7g05478 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 534 - -
Seca7g05478 567 SUPERFAMILY MFS general substrate transporter 12 529 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05478 Seca-Chr7 153454205 153455908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05478 1 540 Nodulin-like Gene Family AT2G39210 58.244 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05478 - - gmx:100782396 838.565