Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05470 | ATGGCCAATTGTCTCATTCTCTTGGCTCAAGGCCATCATGCGCCACCGGATCACAAGTCATCAGGCCTATGCCTTTATGAGTGCAAGACTTGCAACCGATGCTTCCCTTCATTCCAAGCGCTTGGTGGACATAGAGCGAGTCACAAGAAACCTAAGGCTAACGGTAATTGTACGGAAGAAAAGAAAGCAGTTACTGCTTTTGTGAATGATGATCATTATGGCCCCACCATAAATACTATTCTCTCGTTGCAACTAACAAACAGGGGTTCGTATACTGCTACTACTACTGCTGCAATAACAAAATCTAAAGTTCACGAGTGTTCTATTTGTGGTGCTGAATTCTCATCTGGACAAGCCTTGGGAGGCCATATGAGGAGGCACAGAACTCATGTGACCACGTCCACAACGACGTCGTCTATGAGCGGTGGAAGCCCTGAATCACAAGAAGCCAAGAAACCGAGAAACGTTTTGAAATTGGACTTGAATTTGCCAGCACCAGAGGATGATCACAAATTTTCGTTTCAGCCTGGGCCCAGAGAAAACGTTATTGTCTTCTCTACATCTTCTTTGGTGGATTGTCATTACTAA | 588 | 0.449 | MANCLILLAQGHHAPPDHKSSGLCLYECKTCNRCFPSFQALGGHRASHKKPKANGNCTEEKKAVTAFVNDDHYGPTINTILSLQLTNRGSYTATTTAAITKSKVHECSICGAEFSSGQALGGHMRRHRTHVTTSTTTSSMSGGSPESQEAKKPRNVLKLDLNLPAPEDDHKFSFQPGPRENVIVFSTSSLVDCHY. | 196 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05470 | 195 | MobiDBLite | consensus disorder prediction | 131 | 148 | - | - | |
Seca7g05470 | 195 | SMART | c2h2final6 | 26 | 48 | IPR013087 | - | |
Seca7g05470 | 195 | SMART | c2h2final6 | 105 | 127 | IPR013087 | - | |
Seca7g05470 | 195 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 105 | 132 | IPR013087 | - | |
Seca7g05470 | 195 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 1 | 172 | - | - | |
Seca7g05470 | 195 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 28 | 48 | IPR013087 | - | |
Seca7g05470 | 195 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 26 | 53 | IPR013087 | - | |
Seca7g05470 | 195 | Pfam | C2H2-type zinc finger | 26 | 51 | - | - | |
Seca7g05470 | 195 | Pfam | C2H2-type zinc finger | 104 | 128 | - | - | |
Seca7g05470 | 195 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 107 | 127 | IPR013087 | - | |
Seca7g05470 | 195 | SUPERFAMILY | beta-beta-alpha zinc fingers | 26 | 127 | IPR036236 | - | |
Seca7g05470 | 195 | Gene3D | Classic Zinc Finger | 24 | 127 | - | - | |
Seca7g05470 | 195 | MobiDBLite | consensus disorder prediction | 121 | 153 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05470 | Seca-Chr7 | 153370078 | 153370665 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g05470 | 1 | 195 | C2H2 Transcription Factor Family | AT5G03510 | 43.913 | 2.95e-48 | 157 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Seca7g05470 | zf-C2H2_6 | 6.6e-13 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05470 | - | - | tpra:123884313 | 217.624 |