Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05462 ATGCAATTACATGATCCAGTTTCACTTGTCCGTGATCACAACATCACAGAAAAATTAGTGGAACTTGGCATATCTGTGCAAAGCTACAATGGGGATCTGTTGTATGAGCCATCAGAAGTATATGGGGAGAATGGACATGCTTTTACAACCTTTGATCCTTTTTGGAAGAGATGCTTGAACATGCAAATGGAAGCTGTTTCACTTATTCCTCCATGGAAATTAATTCCAGCTGAAGGAAAAGTTGAGAAATGTTCAATTGAAGAACTGGGTCTTGAAAATGAATCAGAGAAATCCAGCAATGCATTACTAGGACGAGCATGGTCTCCAGGTTGGAGCAATGCTGACAAGGCTTTAATAGAATTTGTGGAGAAGCATCTACTGCACTACTCCAAGAATAGGCTAAAGGTTGGTGGAGACTCCACCTCCCTCTTGTCTCCATATCTTTATTTTGGAGAATTGAGTGTCAGGAAAGTTTTCCAATTGGCATGTATGAAGCAGATATTATGGGCAAATGAAGGCAACAGTGTTGGTGAAGAGAGTGTAACTCTTTTCCTTAGGGCCATTGGACTTAGAGAGTACTCACGCTATCTTTGTTTCAATTTTCCATTCACACGTCATGGGAAGCAAGTAAAAAATATATATTGTTTTGGAGTTTGTTACTTGGGGGAGCTCTTTGACAAAATTTACAATCCGTTGCTTACAAAAAATCAAAAGTCTGTTAAACTTGCAGATCTTGGTGTTGCAAGAGAAGAATCTGTGACTGAAATGATGACAGCAGAAACAAAAACTTATTGTTGGATGGCACCATAG 810 0.3926 MQLHDPVSLVRDHNITEKLVELGISVQSYNGDLLYEPSEVYGENGHAFTTFDPFWKRCLNMQMEAVSLIPPWKLIPAEGKVEKCSIEELGLENESEKSSNALLGRAWSPGWSNADKALIEFVEKHLLHYSKNRLKVGGDSTSLLSPYLYFGELSVRKVFQLACMKQILWANEGNSVGEESVTLFLRAIGLREYSRYLCFNFPFTRHGKQVKNIYCFGVCYLGELFDKIYNPLLTKNQKSVKLADLGVAREESVTEMMTAETKTYCWMAP. 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05462 269 PANTHER CRYPTOCHROME 3 209 IPR002081 -
Seca7g05462 269 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 95 206 IPR036134 -
Seca7g05462 269 Gene3D - 34 201 - -
Seca7g05462 269 Pfam DNA photolyase 8 63 IPR006050 -
Seca7g05462 269 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 4 78 IPR036155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05462 Seca-Chr7 153274341 153288170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05462 230 269 MAP Kinase Kinase Kinase AT5G01850 82.500 7.83e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05462 K12119 - gmx:100808627 353.599