Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05460 ATGCAATTACATGATCCAGTTTCACTTGTCCGTGATCACAACATCACAGAAAAATTAGTGGAACTTGGCATATCTGTGCAAAGCTACAATGGGGATCTGTTGTATGAGCCATCAGAAGTATATGGGGAGAATGGACATGCTTTTACAACCTTTGATCCTTTTTGGAAGAGATGCTTGAACATGCAAATGGAAGCTGTTTCACTTATTCCTCCATGGAAATTAATTCCAGCTGAAGGAAAAGTTAAGAAATGTTCAATTGAAGAACTGGGTCTTGAAAATGAATCAGAGAAATCCAGCAATGCATTACTAGGACGAGCATGGTCTCCAGGTTGGAGCAATGCTGACAAGGCTTTAATAGAATTTGTGGAGAAGCATCTACTGCACTACTCCAAGAATAGGCTAAAGGTTGGTGGAGACTCCACATCCCTCTTGTCTCCATATCTTTATTTTGGAGAATTGAGTGTCAGGAAAGTTTTCCAATTGGCACGTATGAAGCAGATATTATGGGCAAATGAAGGCAACAGTACTCTTTTCCTTAGGGCCATAGGACTTAGAGAGTACTCACGCTATCTTTGTTTCAATTTTCCATTCACACGTGAGAGAGCACTTCTTGGAAACTTAAAGTTTTTTCCTTGGAATGCTGATCCTGATAACTTTAAGATTTGGAGACAAGGTCATGGGAAGCAAGTAAAAAATATATATTGTTTTGGAGTTTGTTACTTGGGGGAGCTCTTTGACAAAATTTACAATCCGTTGCTTACAAAAAATCAAAAGTCTGTTAAACTTGCAGATCTTGGTGTTGCAAGAGAAGAATCTGTGACTGAAATGATGACAGCAGAAACAAAAACTTATTGTTGGATGGCACCATAG 870 0.3885 MQLHDPVSLVRDHNITEKLVELGISVQSYNGDLLYEPSEVYGENGHAFTTFDPFWKRCLNMQMEAVSLIPPWKLIPAEGKVKKCSIEELGLENESEKSSNALLGRAWSPGWSNADKALIEFVEKHLLHYSKNRLKVGGDSTSLLSPYLYFGELSVRKVFQLARMKQILWANEGNSTLFLRAIGLREYSRYLCFNFPFTRERALLGNLKFFPWNADPDNFKIWRQGHGKQVKNIYCFGVCYLGELFDKIYNPLLTKNQKSVKLADLGVAREESVTEMMTAETKTYCWMAP. 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05460 289 Pfam DNA photolyase 8 63 IPR006050 -
Seca7g05460 289 PANTHER CRYPTOCHROME 3 226 IPR002081 -
Seca7g05460 289 Gene3D - 34 195 - -
Seca7g05460 289 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 4 78 IPR036155 -
Seca7g05460 289 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 95 226 IPR036134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05460 Seca-Chr7 153236752 153241696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05460 250 289 MAP Kinase Kinase Kinase AT5G01850 82.500 1.17e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05460 K12119 - gmx:100808627 382.874