Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05455 ATGCAAATGGAAGCTGTCTCACTTATTCCTCCATGGAAATTAATTCCAGCTGAAGGAAAAGTTGAGAAATGTTCAATTGAAGAACTGGGTCTTGAAAATGAATCAGAGAAATCCAGCAATGCATTACTAGGACGAGCATGGTCTCCAGGTTGGAGCAATGCTGACAAGGCTTTAATAGAATTTGTGGAGAAGCATCTACTGCACTACTCCAAGAATAGGCTAAAGGTTGGTGGAGACTCCACCTCCCTCTTGTCTCCATATCTTTATTTTGGAGAATTGAGTGTCAGGAAAGTTTTCCAATTGGCATGTCATGGGAAGCAAGTAAAAAATATATATTGTTTTGGAGTTTGTTACTTGGGGGAGCTCTTTGACAAAATTTACAATCCGTTGCTTACAAAAAATCAAAAGTCTGTTAAACTTGCAGATCTTGGTGTTGCAAGAGAAGAATCTGTGACTGAAATGATGACAGCAGAAACAAAAACTTATTGTTGGATGGCACCATAG 504 0.3889 MQMEAVSLIPPWKLIPAEGKVEKCSIEELGLENESEKSSNALLGRAWSPGWSNADKALIEFVEKHLLHYSKNRLKVGGDSTSLLSPYLYFGELSVRKVFQLACHGKQVKNIYCFGVCYLGELFDKIYNPLLTKNQKSVKLADLGVAREESVTEMMTAETKTYCWMAP. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05455 167 SUPERFAMILY Protein kinase-like (PK-like) 128 167 IPR011009 -
Seca7g05455 167 PANTHER CRYPTOCHROME 10 101 IPR002081 -
Seca7g05455 167 Gene3D - 7 122 - -
Seca7g05455 167 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 35 104 IPR036134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05455 Seca-Chr7 153162563 153167147 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05455 128 167 MAP Kinase Kinase Kinase AT5G01850 82.500 6.45e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05455 K12119 - gmx:100233234 182.57