Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05445 ATGGAAGCTGTCTCACTTATTCCTCCATGGAAATTAATTCCAGCTGAAGGAAAAGTTAAGAAATGTTCAATTGAAGAAATGGGTCTTGAAAATGAATCAGAGAAATCCAGCAATGCATTACTAGGACGAGCATGGTCTCCAGGTTGGAGCAATGCTGACAAGGCTTTAATAGAATTTGTGGAGAAGCATCTACTGCACTACTCCAAGAATAGGCTAAAGGTTGGTGGAGACTCCACCTCCCTCTTGTCTCCATATCTTTATTTTGGAGAATTGAGTGTCAGGAAAGTTTTCCAATTGGCACGTATGAAGCAGATATTATGGGCAAATGAAGGCAACAGTACTCTTTTCCTTAGGGCCATAGGACTTAGAGAGTACTCACGCTATCTTTGTTTCAATTTTCCATTCACACGTGAGAGAGCACTTCTTGGAAACTTAAAGTTTTTTCCTTGGAATGCTGATCCTGATAACTTTAAGATTTGGAGACAAGGTCATGGGAAGCAAGTAAAAAATATATATTGTTTTGGAGTTTGTTACTGGGGGGAGCTCTTTGACAAAATTTACAATCCGTTGCTTACAAAAAATCAAAAGTCTGTTAAACTTGCAGATCTTGGTGTTGCAAGAGAAGAATCTGTGACTGAAATGATGACAGCAGAAACAAAAACTTATTGTTGGATGGCACCATAG 684 0.3889 MEAVSLIPPWKLIPAEGKVKKCSIEEMGLENESEKSSNALLGRAWSPGWSNADKALIEFVEKHLLHYSKNRLKVGGDSTSLLSPYLYFGELSVRKVFQLARMKQILWANEGNSTLFLRAIGLREYSRYLCFNFPFTRERALLGNLKFFPWNADPDNFKIWRQGHGKQVKNIYCFGVCYWGELFDKIYNPLLTKNQKSVKLADLGVAREESVTEMMTAETKTYCWMAP. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05445 227 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 33 164 IPR036134 -
Seca7g05445 227 Gene3D - 8 136 - -
Seca7g05445 227 PANTHER CRYPTOCHROME 8 164 IPR002081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05445 Seca-Chr7 153085942 153095606 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05445 188 227 MAP Kinase Kinase Kinase AT5G01850 82.500 4.09e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05445 K12119 - gmx:100233234 283.108