Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05420 ATGGATATTATTATAACACATGCAGATCCCTCTGTGGTTAATAATGTCATTGAGGACTCTCATATCTTCAAGGTCAAACAAGGCAATATTCCTTTGTTGGTTGATGCAGAACACACTGCGGTTCAGCCAGCTATTGATTACTTTACATACTCTTCTGCCATCATGCACAACAATGGTGAGAACCCCATTGTGTTTGGAATTATTCAAACTTACTTGAAAGATGCCAAGGAGAGATTGTTGCTGACAACAGAGGTTGCAGGCAAAATGGGAGTTCCAATAGGATTCAAATTGGTCAGGGGTGCTTACATGTCCACAGAGAGTAAATTTGCTGAGTCTTTGGGGTATGCATCCCTAATTCACAATACCATACAGAACACACACAATTGCTTCAATGACTGTTCATCATTCCTGCTTGAGAAGATTGCCAATGGACCTGGGAAATTGGCTGCTGCAAAAGCACATGAATTGGGGATTGGAAAGGTGAACCACAGGCTGGAATTTGCACAGCTATATGGAATGTCAGATGCCCTTTCCTTTAGTTTGAGCAATGCAGGGTTTCAGGTTAGCAAGTATATGCCATTTGGACCAGTAGAGATGGTTATGCCTTACCTTCTGAGAAGGGCTGAAGAGAACAGAGGACTTTTGGCTGCTTCAGGATTTGATAGGCAACTTATAAGACAACTGTTGCTTACAGAAAATCAGAAGTCTGTTAAACTTGAAGATTTTGGTGTTGCAAGAGAAGAATCTGTGACTGAAATGATGACAGCAGAAGCAAAAACTTATTGTTGGATGGCACCATAG 801 0.4132 MDIIITHADPSVVNNVIEDSHIFKVKQGNIPLLVDAEHTAVQPAIDYFTYSSAIMHNNGENPIVFGIIQTYLKDAKERLLLTTEVAGKMGVPIGFKLVRGAYMSTESKFAESLGYASLIHNTIQNTHNCFNDCSSFLLEKIANGPGKLAAAKAHELGIGKVNHRLEFAQLYGMSDALSFSLSNAGFQVSKYMPFGPVEMVMPYLLRRAEENRGLLAASGFDRQLIRQLLLTENQKSVKLEDFGVAREESVTEMMTAEAKTYCWMAP. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05420 266 PANTHER PROLINE OXIDASE 26 229 IPR015659 GO:0004657|GO:0006562
Seca7g05420 266 SUPERFAMILY Protein kinase-like (PK-like) 228 266 IPR011009 -
Seca7g05420 266 SUPERFAMILY FAD-linked oxidoreductase 25 220 IPR029041 -
Seca7g05420 266 Pfam Proline dehydrogenase 25 213 IPR002872 -
Seca7g05420 266 Gene3D - 20 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05420 Seca-Chr7 152831887 152840371 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05420 228 266 MAP Kinase Kinase Kinase AT5G01850 84.615 2.14e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05420 K00318 - gmx:100797464 347.051