Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05401 ATGTTTCAGGAATGTTTTGATCCTATAGTTGATGCTGCTACTGGACGTGACCTTATTCCCACCATGGTTTATGGAAGGAATTTGCAGAATCAGGATTTTGGAGGAATGTATTGTGCATTATTAATGGTCAATTCATCTGTGGTATCTGCGGCCATGCTTCGAATCTTTGGTAGAGATATTGCAGAACTCCCTTTAGTTGCTACAAGAAATAAGAACCGTGGAAAGGGCTACTTCCAAACACTGTTCTCATGCATCGAGAGGCTGCTTGCTTTCTTGAATGTGAAGAGCCTTGTACTACCGGCAGCTGAAGAAGCAGAATCCATATGGACAGATAAATTTGGGTTTAGCAAGATGAAACCTGACCAGCTTACCGAGTATAGAAAGAACTGCAATCAGATGATGGCATTCAAAGGGACAGTTATGCTTCATAAAACGGTGCCTCAATGTCGGGTCATCAATACTCAATCATGA 471 0.4183 MFQECFDPIVDAATGRDLIPTMVYGRNLQNQDFGGMYCALLMVNSSVVSAAMLRIFGRDIAELPLVATRNKNRGKGYFQTLFSCIERLLAFLNVKSLVLPAAEEAESIWTDKFGFSKMKPDQLTEYRKNCNQMMAFKGTVMLHKTVPQCRVINTQS. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05401 156 Gene3D - 7 147 - -
Seca7g05401 156 PANTHER AUTOIMMUNE REGULATOR 2 145 - -
Seca7g05401 156 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 26 119 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05401 Seca-Chr7 152597743 152599471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05401 1 153 PHD Transcription Factor Family AT2G36720 60.131 1.90e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05401 - - gmx:100798276 279.641