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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca7g05400
ATGGACTCCTCCACGCGAGAACCTCAAACGGCAACTGCGTTTCATGATTCCGATAATGACAGCTGCAAGCGGAGAGGGGAAGGGAAGGTGGTGAACGGCTACATCGTTTATACTCGACGGAAGAGGAACCTCCATTCCGAGAATGAGAAAGCCAAGAGGCTCAAGACCTGCGACAATGCGGGAGTTAAAGTGGAAAGCCGAGTGTTAGTCGAGGAAGCTGCGGTGCTGAACGACGCCGTTTTCGGGAATTTCAAGCGGCATCGGCGATCGGCGTTGAAGAAGCCGAAGGTTGAGTCAGAAGATGCTGCTGCTGATAAGAGTGACTTGGAATTGAAGATTCCCAACAAGATCATCATGGTCAACAAGAAACCAATGACCGTGAAGGAGCTTTTCGATACTGGTTTGCTCGATGGGATTCCAGTTGTTTACGTGGGTTGCAAGAAGGCTTCAACTTCGGGATTGCGGGGTGTAATTACAGATGGGGGGATATTGTGCTCGTGCTGTCTGTGCAATGGACGCAGAGTTATTCCACCTTCCCAATTCGAGATTCATGCTTGCAATACATATAAGAGGGCAGCGCAGTATATTTGCTTTGAAAACGGGAAGAGCCTTCTTGAACTATTAGGAGCATGCAGAGCAGCTCCCCTAAGTACTTTGGAGGCGACCATTCAAAATTTTGTTTGTTCGCCACCTGAAGAAAAATATTTTACTTGCAAAAGTTGCAAAGGGTGTTTTCCTTCTTCAACTGTTGAAAGAGTTGGGCTTATATGCCATTCTTGCATGGAAGCAAGGAAATCTGAAGGCAGTTCTATTCATGCAGTTGGCAAAAGAATCAGGTCCCCTCGACCCATATTGTTCTCTAGCCCATCTTGTACTTCTGAACTGTGCATCTCTTCACAAACTAAAAGACGCTGGAAGATGAAAACAAAGTCATCAAAACGGGTTAGCTGCTCAAATTCTACCAGGAGTGCTTCTGTGCCTATTGTTTTCCGAAAGAAAAGTTTGTGCAGCATGGAGAAGAAGCCATCGAAACTGTCAGCAAAATTGAAGACCGCTCCCATTACTTCTAATTCAAAGTGTATATCTCCAAAAAATAAGAGTCAGTGGAGGATCACTAAAAAGCATCAGCGGTTGCATAAATTAATTTTTGAAGAAGATGGATTGCCTGATGGAGCTGAAGTAGCTTATTATGCACGTGGAAAGAAATTGCTTGAGGGTGTCAAAAGGCGCTCTGGAATTTTTTGTTGGTGCTGCAACACTTTGATCAGCCCCTCACAGTTTGAGGTCCATGCAGGGTGGGCTTCTCGCAGGAAACCTTATGCATACATTTACACGTCGAATGGGGTGTCTCTCCATGAGTTAGCAATATTTCTCTCAAAAGATCGTAAATACACTGCAAAGTATAATGATGATGCATGCGTTGTTTGTTGGGATGGTGGAAATCTGTTGCTCTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGTGCATCTATATCAAGTATTCCACGTGGTGAGTGGTACTGTCAAATTTGTCAAAACATGTTCCTTGGAGAAAGATCTGTGACACACAGTGCTGATGCTTTAGCAGCTGGAAGGGTTGAAGGAGTTGATCCCATTGAGCAAATTGCCAAGAGATGCATTCGCATAGTGAAGGACGTTCATGCTGAGATTGGTGGATGTGCTTTATGCAGTGGTTCTGACTTCAGCCAATCAGGATTTGGTCCTCGCACAATAATAATTTGTGATCAGTGTGAAAAGGAATATCATGTCGGCTGTTTGAGGGATCATAAGATGGCATATTTGAAGGAGTTGCCGGAAGGGAATTGGTTCTGTTGCAATGATTGCACAAGAATACATTCTATTTTGGAGAAAATCCTGGTTAAGGTGGCTGAGAGACTCCCTGAATCTCTTTTGGATGTTATAAAGAAAAAGCAAGAGGAAAGGCTTTTAGAGCCCAATAATGAGATTGATGTAAGATGGAGACTTCTTAATGGTAAAGTTGCTTCTCCTGAAACTAGGCCATTGCTTCTGGAGGCCGTGTCAATGTTTCATGTAAGTTCTGCCTGTGCTTATGAATTGCTTCATCATTATCATCATCATATCTTCTTTTCCTTGGGTGGTTGA
2127
0.4386
MDSSTREPQTATAFHDSDNDSCKRRGEGKVVNGYIVYTRRKRNLHSENEKAKRLKTCDNAGVKVESRVLVEEAAVLNDAVFGNFKRHRRSALKKPKVESEDAAADKSDLELKIPNKIIMVNKKPMTVKELFDTGLLDGIPVVYVGCKKASTSGLRGVITDGGILCSCCLCNGRRVIPPSQFEIHACNTYKRAAQYICFENGKSLLELLGACRAAPLSTLEATIQNFVCSPPEEKYFTCKSCKGCFPSSTVERVGLICHSCMEARKSEGSSIHAVGKRIRSPRPILFSSPSCTSELCISSQTKRRWKMKTKSSKRVSCSNSTRSASVPIVFRKKSLCSMEKKPSKLSAKLKTAPITSNSKCISPKNKSQWRITKKHQRLHKLIFEEDGLPDGAEVAYYARGKKLLEGVKRRSGIFCWCCNTLISPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDRKYTAKYNDDACVVCWDGGNLLLCDGCPRAFHKECASISSIPRGEWYCQICQNMFLGERSVTHSADALAAGRVEGVDPIEQIAKRCIRIVKDVHAEIGGCALCSGSDFSQSGFGPRTIIICDQCEKEYHVGCLRDHKMAYLKELPEGNWFCCNDCTRIHSILEKILVKVAERLPESLLDVIKKKQEERLLEPNNEIDVRWRLLNGKVASPETRPLLLEAVSMFHVSSACAYELLHHYHHHIFFSLGG.
709
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca7g05400
708
SUPERFAMILY
FYVE/PHD zinc finger
460
515
IPR011011
-
Seca7g05400
708
SMART
PHD_3
472
513
IPR001965
-
Seca7g05400
708
SMART
PHD_3
560
617
IPR001965
-
Seca7g05400
708
Pfam
PHD-finger
473
514
IPR019787
-
Seca7g05400
708
FunFam
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
459
536
-
-
Seca7g05400
708
Pfam
Tify domain binding domain
156
208
IPR032308
-
Seca7g05400
708
Pfam
Tify domain binding domain
406
456
IPR032308
-
Seca7g05400
708
SUPERFAMILY
FYVE/PHD zinc finger
551
618
IPR011011
-
Seca7g05400
708
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
458
557
IPR013083
-
Seca7g05400
708
FunFam
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
557
619
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca7g05400
Seca-Chr7
152590822
152597223
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca7g05400
105
685
PHD Transcription Factor Family
AT2G36720
49.340
0.0
589
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
PHD
Seca7g05400
TDBD
6.6e-13
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca7g05400
-
-
gmx:100798276
963.755
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