Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05398 ATGCAGTCGTTTAACTGCCAAATTCCCATACAGTATCCAAACGTAAATCCTCAAAAAATGCCTTGTTCACTCACTCTCTCATCTCCCTCTCTCTTCCCTCCCTACAAAGCCACTCGTTTCCCTGTCACTCCAAAATCTTATCCACTTCACCGTCTCTCCGTGAAATCCTCAATTAACAAAAACCCAGACACCAGCACTAAGCCCAGTTCCTGGGTAAGCCCAGATTGGCTCACTTCCCTATCTAGGTCCCTGACCACAGGGAAAGACGATTCTGGCATTCCTGTAGCAAGTGCCAAGCTTGATGATGTTTCTGATCTTCTGGGTGGTGCCCTTTTTCTCCCTTTGTTCAAATGGATGAAAGAGTATGGCCCCATTTACCGTCTAGCTGCTGGCCCTAGAAACTTTGTGGTGGTTAGTGACCCCGCCATTGCCAAGCATGTGCTCAAGAATTATGGAAAATATGCCAAGGGTCTCGTTGCTGAGGTCTCAGAGTTCCTTTTTGGTTCCGGTTTTGCAATTGCTGAAGGTCCACTCTGGACGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCACAAGCGGTACTTGTCTCTTATAGTGGATAGGGTATTTTGTAGATGTGCTGAGAGATTAGTGGAGAAGCTACAATCTGATGCACTTAATGGAACTGCTGTTAACATGGAGGAAAAGTTTTCACAGTTGACTCTTGATGTTATTGGTTTATCTGTATTCAACTACAACTTTGATTCACTTAATGCGGATAGTCCTGTTATTGGTGCTGTTTACACTGCACTGAAAGAGGCAGAGGCTCGATCAACTGATCTTTTGCCATATTGGAAGGCAAGTTCTTTCTCATTTCTCATTCATGACATGGATTTTCTTTCTGTTAACTTTCTTTGTAAGATAATCCCGAGACAAATAAAGGCTGAAAAGGCTGTTAGTGTTATCAGGAAAACTGTTGAAGATCTTATTGAAAAATGTAAAGAGATTGTAGAATCTGAGGGTGAAAGGATTGATGTTGATGAATATGTGAATGACACTGATCCTAGCATCCTCCGGTTCTTGCTTGCCAGCAGAGAAGAGGTTTGCTGTACTCTATTGATGACATATACTATGCTTTTATCATTGTTCTTATGCAGATTGCTGTATATTCAGAATGTCTGTACCGCCATTGCTTCCTTCCCAAAACATGCCATATCACTTGATGATAACACTTTTTGTCGTTCTTTGTCTGGTCCTGTTTCCAGTGCACAATTAAGAGATGATCTTTTGTCACTATTAGTTGCTGGTCATGAGACCACCGGTTCGGTGCTGACCTGGACACTTTATCTTCTAAGTAAGGATTCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAAAGTTTTACAGGGAAGGCGTCCTGCCTATGAAGATATTAAAGATCTTAAGTTCTTGACACGCTGCATTATTGAGTCACTCCGGCTCTATCCACACCCCCCTGTATTGATAAGAAGAGCTCAAGTTCCTGATGAGCTCCCTGGTGCTTACAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATACACCATTCTTCTGAGGTTTGGGATAGGGCTGAAGAGTTTGTGCCAGAAAGATTTGATTTGGATGGTCCGATGCCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCAGTGGAGGGCCCCGCAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTATAGTTGCTCTTGCAATCTTTCTACAGCACATGAACTTTGAGTTGGTCCCTGATCAGAATATTAGTATGACTACAGGAGCAACAATACATACAACAAATGGCTTGTACATGAAACTCAGCCGACGATTGAAATAG 1869 0.4254 MQSFNCQIPIQYPNVNPQKMPCSLTLSSPSLFPPYKATRFPVTPKSYPLHRLSVKSSINKNPDTSTKPSSWVSPDWLTSLSRSLTTGKDDSGIPVASAKLDDVSDLLGGALFLPLFKWMKEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYAKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKRYLSLIVDRVFCRCAERLVEKLQSDALNGTAVNMEEKFSQLTLDVIGLSVFNYNFDSLNADSPVIGAVYTALKEAEARSTDLLPYWKASSFSFLIHDMDFLSVNFLCKIIPRQIKAEKAVSVIRKTVEDLIEKCKEIVESEGERIDVDEYVNDTDPSILRFLLASREEVCCTLLMTYTMLLSLFLCRLLYIQNVCTAIASFPKHAISLDDNTFCRSLSGPVSSAQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDKVLQGRRPAYEDIKDLKFLTRCIIESLRLYPHPPVLIRRAQVPDELPGAYKVNAGQDIMISVYNIHHSSEVWDRAEEFVPERFDLDGPMPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSRRLK. 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05398 622 Pfam Cytochrome P450 413 604 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 Pfam Cytochrome P450 115 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS E-class P450 group I signature 568 591 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS E-class P450 group I signature 437 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS E-class P450 group I signature 558 568 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS E-class P450 group I signature 520 544 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS E-class P450 group I signature 417 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS E-class P450 group I signature 119 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PANTHER CYTOCHROME P450 FAMILY 4 117 359 - -
Seca7g05398 622 CDD CYP97 113 614 - -
Seca7g05398 622 Gene3D Cytochrome P450 95 622 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 SUPERFAMILY Cytochrome P450 109 620 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS P450 superfamily signature 559 568 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS P450 superfamily signature 568 579 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 PRINTS P450 superfamily signature 428 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g05398 622 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 561 570 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05398 Seca-Chr7 152559862 152567551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05398 36 620 Cytochrome P450 AT3G53130 71.356 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05398 K09837 - gmx:100803324 906.746