Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05393 ATGTTGGTGCCACCATGGCTCAATTCACTGCTTAACACACCCTTTTTCAATGTGTGTCGGATTCATGGAGATGCCGCCAGGAGCGAATGTAACATGTTTTGCTTGGACTGCAATGTTGATGCCTTTTGCTTTTATTGCCGTTCCTCAAGACACAAGGATCACCAAGTCATTCAGATAAGGCGATCTTCTTATCATGATGTGGTGAGAGTGGCAGAAATTCAGAAGGTGTTGGACATTAGTGGAGTTCAGACATATGTGATCAACAGTGCCAGAGTTCTGTTTCTGAATGAGAGGCCTCAGCCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTAGACCCATTTCGCTTCTGTTCTTTAGGATGTAAGCTTGTAGGAATAAGGAGAAATGGGGATGCAAGCTTTGTTTTGGATGGTAACAATGAGGCATCTTCAATGGAGGGAATGTCAAGGAGTTCAGTCTCTTCAAGACAGCAAAGAGAAGAATTGCGTGAAGGCTCACAACAAGATATGTATCCAGCCACGCCTCCTACACCTGCTTCAAACGCAAGGAGAAGAAAAGGCATTCCTCACAGGGCTCCTTTTGGCTCCTAA 615 0.4472 MLVPPWLNSLLNTPFFNVCRIHGDAARSECNMFCLDCNVDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIRRNGDASFVLDGNNEASSMEGMSRSSVSSRQQREELREGSQQDMYPATPPTPASNARRRKGIPHRAPFGS. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05393 204 Pfam PLATZ transcription factor 60 131 IPR006734 -
Seca7g05393 204 Gene3D Classic Zinc Finger 17 62 - -
Seca7g05393 204 SUPERFAMILY B-box zinc-binding domain 16 61 - -
Seca7g05393 204 MobiDBLite consensus disorder prediction 148 163 - -
Seca7g05393 204 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 202 - -
Seca7g05393 204 MobiDBLite consensus disorder prediction 148 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05393 Seca-Chr7 152499811 152502253 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca7g05393 PLATZ 9.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05393 - - gmx:100809455 362.073