Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05392 ATGTCTACATCTGAGAGAGAGACATGGACTCAAGAAATGGACGATGCTCTTGTTGATGCCTTTTTGCATCAACTAAATGAAGGAAATAAAGTGAATGGGACATTTTCCTCAAAAGCATATGTGAGCATAATTAAGGAGCTACAAGATAAATTCCAGAGACCGCTTCACAAGGACAAGGTGCAAAATCGTTGGAAGGCACTAAAAAAACGTTTTAACAAATGTTACGATGTATTCAAAAACTTGAGTGGATTTGCATGGGATGCAAGTACTCATCGTTGGTTTGCTGAACCCGAAGTTTGGCAAAAATTAATTGAGGCTAAACCTGAAGCTGGAGAGTGGATGAGAAAGCCCATTCGCAACTATGACAAGATGGTGACTCTTTGTTCCGATGATAAAGCAACGGGAGAACTTTCTAAGGATGCAGGTGATGTCAGAAGCGAGAAGCCAATTAATGTTGAATCAGAGTCTCTGGATACCAATGGGGTGACTTTAGAGAGCATGGAAGAGACAAACAATGAGCAAGATGTGACATCTCCTCAAGTGCAAATTATTGAAGAGCCTAAAGCTAAAAGATCTAGGAAGTCAAAGGTTGAAAATGAAGCTGAAGGATTAAAGGAGGCACTCATACATATTGTTGAAGCTTTCACAGACAGTACTACAGCTCTTAGAGAAAGTACTGCAGCTTATGAGAGAGTTAATAAAAAACTTCCAATTTCTGAAGCTGAACTTTGGAAGTTGTTAGAGGAATTGAGGATAGAAAGTCATTCACAATATCGTGCATATCTATATCTGATTAATAATCCTGACATGATTAGAGCATTACTTGGGTGCCCAAAGGATAAGCAAAGGGAATTATTACTTGAAATGATTGGTCCTGCACAAATAGAGGCATTATACCAATATGCCAAATTTCAGTTTGAGTGTGGAAACTACTCTGGTGCTATATCTGTTGAACTCATCATTCTAATAATCGGGAAACAGAGAAAGCACCAAAAAAAAGAGGAGAAAGAGAGGAACCATCACCGCGAGCCGCCATCATCTTCGCCACCATGGATGACCACTCCATCATCGTCCAGGCGCCTTGCCGCTCGAAACGTCGTCGCACGGCCATCCGTCGGGACCACGCTTTGTTCGGCGGGCACCGTCGCGCGGCCTCCTCCTCTTCCCCGCTGTAGTGGCAGGCCGCCATGGCTCCACCGCAATAACATACTCTGA 1215 0.4288 MSTSERETWTQEMDDALVDAFLHQLNEGNKVNGTFSSKAYVSIIKELQDKFQRPLHKDKVQNRWKALKKRFNKCYDVFKNLSGFAWDASTHRWFAEPEVWQKLIEAKPEAGEWMRKPIRNYDKMVTLCSDDKATGELSKDAGDVRSEKPINVESESLDTNGVTLESMEETNNEQDVTSPQVQIIEEPKAKRSRKSKVENEAEGLKEALIHIVEAFTDSTTALRESTAAYERVNKKLPISEAELWKLLEELRIESHSQYRAYLYLINNPDMIRALLGCPKDKQRELLLEMIGPAQIEALYQYAKFQFECGNYSGAISVELIILIIGKQRKHQKKEEKERNHHREPPSSSPPWMTTPSSSRRLAARNVVARPSVGTTLCSAGTVARPPPLPRCSGRPPWLHRNNIL. 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05392 404 PANTHER EXPRESSED PROTEIN 3 250 - -
Seca7g05392 404 Pfam Myb/SANT-like DNA-binding domain 8 102 IPR024752 -
Seca7g05392 404 MobiDBLite consensus disorder prediction 331 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05392 Seca-Chr7 152476570 152481661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05392 267 314 Eukaryotic Initiation Factors Gene Family AT3G57290 59.615 5.74e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05392 - - mtr:25499081 341.273