Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05385 ATGGAACTCTCTCTATTCCGCCATCAGCAACATCCTATGCTTCTTCACTGCCCTCTCTTGACAAACTCCACAGGGACACACAACAAAAGACTTTACAGCAAAAGTTCATATAGGTTACCATGCCGCTGCTCATATTCTTCCTCCGATAATACTGCTGCAGAACAACCAATCACAGTGTCTTTACAGCTTGAAGGAAGGAGAGCATTACTCAGTTGTCTCCTCACAACTGTTGCTGGAGTTTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTTAGAGGAGCCAAAATTCCTGAAAGTGATTACACAACCTTGCCCAATGGTCTAAAGTACTATGATTTGAAGGTTGGGAGTGGAGCTGAGGCTGTAAAAGGATCCCGTGTTGCAGTTCACTATGTTGCTAAGTGGAGGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCATATGGTTTTGATGTAGGCCAATCTGAGAGAGGAACAGTCCTTAAAGGGTTGGATTTTGGAGTACAGGGCATGCGAGTAGGAGGTCAGCGACTGTTAATTGTTCCTCCTGAACTTGCATATGGGAAGAAGGGAGTTCAAGAAATCCCTCCAAATGCAACAATAGAGGTGAATTATTCTGATCTCTCTGTTATGATTTGTTCCTGTAATTTGATACTACAATTAATTAACGTTTCACATGACACATACTGTATACCTATGCATCTACATAAATGGAATACTGTTCTGGGTTGA 768 0.431 MELSLFRHQQHPMLLHCPLLTNSTGTHNKRLYSKSSYRLPCRCSYSSSDNTAAEQPITVSLQLEGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGSGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDFGVQGMRVGGQRLLIVPPELAYGKKGVQEIPPNATIEVNYSDLSVMICSCNLILQLINVSHDTYCIPMHLHKWNTVLG. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05385 255 SUPERFAMILY FKBP-like 100 213 - -
Seca7g05385 255 Gene3D - 89 223 IPR046357 GO:0003755
Seca7g05385 255 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 125 214 IPR001179 GO:0003755
Seca7g05385 255 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 39 167 IPR044180 -
Seca7g05385 255 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 129 223 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05385 Seca-Chr7 152417606 152422426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05385 129 249 Calmodulin-binding Proteins AT5G48570 33.858 1.97e-12 64.7