Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05369 ATGCTGATGCTACACTTTGATCCCCCTCAATCATTCACAACCAAATTTTTGTTCACCCTTTTTGCACTGTTCAACTATTCGATTAACGGCATCAGTTCTGGATTGCTAGGAGTAGAAAGCCCTTTACAACAGCAACAACAGAACCTCTCTAATCAGCAAAATCCTCACCATTTGCACCATCCCCAAATGGTTTCTTATGCCCCCCATCATGACACCGACACACACCAGCAACAGCTACAGCAACAGCAACCAATCAAACATGGGTACCCTCCCTATTCAGCCAAGAGCAAGCAACAACAAAGCTCCCTCAGTGATGAGGATGAGCCTGGGTTCCATGCAGAAGAGAGCTCAGGGGACCCCAAGAGGAAGATTTCACCTTGGCAGAGAATGAAGTGGACAGATACCATGGTTAGGCTCTTGATAATGGCGGTTTATTACATTGGTGATGAAGCTGGTTCAGAAGGGACTGACCCCACTGGTAAGAAGAAGTCAACCGGTTTGCTGCAGAAGAAAGGGAAGTGGAAATCAGTGTCAAGGGCTATGATGGAAAAGGGGTTCTATGTGTCTCCTCAGCAATGTGAGGATAAGTTCAATGACTTGAACAAGAGGTACAAGAGAGTGAATGATATACTTGGAAAGGGAACAGCTTGCAGGGTGGTGGAAAATCAGAACTTGTTGGATACAATGGACTTGTCACCAAAGATGAAAGAGGAAGTGAAGAAGTTACTCAATTCAAAGCACTTGTTCTTCAGGGAAATGTGGCTGAGGATGTTGAAAGTGGGAAGTGGGGAAGAGGATGAGGATGAGGATGACGATGATGACTCAGAGGACTATTCTGATGAGGATGAAGAAGAATCAGCAGAAGGTGGTTCAAGGGGACAAGTTGGGCATGGACATGAAGATGAGGATGAGAATGATGGAAGGACATCAAGGAAGAGGTCAAGGAAAACAGCAGGGCTTTCTATGTCATCCCATATGATGCAGCAACTGAACACTGAGGTAACTGGTGTGTTGCAAGATGGGGGTAGGAGCCCTTGGGAGAAAAAGCAATGGATGAAGAGTAGGATAATGCAATTAGAGGAGCAGCAAATTAGCTATCAAACTCAAGCATTTGAGCTGGAAAAGCAGCGGTTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGAGAGCTAAACTTGAAAATGAACGCAGAAGGCTAGAAAATGAGAGAATGGTTTTGATCATTCGACAGAAGGAGCTTGAATTGCTGAGTATTCAACACCAACAACAACATCATCAGCAACAACAACAGCAACATTCTTCCACATAG 1320 0.4485 MLMLHFDPPQSFTTKFLFTLFALFNYSINGISSGLLGVESPLQQQQQNLSNQQNPHHLHHPQMVSYAPHHDTDTHQQQLQQQQPIKHGYPPYSAKSKQQQSSLSDEDEPGFHAEESSGDPKRKISPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPTGKKKSTGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDTMDLSPKMKEEVKKLLNSKHLFFREMWLRMLKVGSGEEDEDEDDDDDSEDYSDEDEEESAEGGSRGQVGHGHEDEDENDGRTSRKRSRKTAGLSMSSHMMQQLNTEVTGVLQDGGRSPWEKKQWMKSRIMQLEEQQISYQTQAFELEKQRLKWARFSSKKEREMERAKLENERRRLENERMVLIIRQKELELLSIQHQQQHHQQQQQQHSST. 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05369 439 MobiDBLite consensus disorder prediction 69 106 - -
Seca7g05369 439 MobiDBLite consensus disorder prediction 261 327 - -
Seca7g05369 439 MobiDBLite consensus disorder prediction 43 59 - -
Seca7g05369 439 Pfam Myb/SANT-like DNA-binding domain 129 221 IPR044822 -
Seca7g05369 439 MobiDBLite consensus disorder prediction 288 313 - -
Seca7g05369 439 Coils Coil 384 413 - -
Seca7g05369 439 Gene3D - 132 206 - -
Seca7g05369 439 PANTHER F16F4.11 PROTEIN-RELATED 29 424 - -
Seca7g05369 439 MobiDBLite consensus disorder prediction 264 287 - -
Seca7g05369 439 Coils Coil 356 376 - -
Seca7g05369 439 MobiDBLite consensus disorder prediction 107 124 - -
Seca7g05369 439 MobiDBLite consensus disorder prediction 43 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05369 Seca-Chr7 152263167 152265244 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca7g05369 Myb_DNA-bind_4 2.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05369 - - gmx:547619 470.314