Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05366 ATGCCAGACCAACTCACGGAAGGCACGCTCCGTCAAACCCTCCCACACACACTTTCTCTCAACGCTCCACTCTCTTTCCCTAACGTCCCCGACGACGCCGTTCCCTCAAACCTTACCGTTATGGCCTCTTGCGACGACGACGACGATTTCTCACTCCTCCGTGACGACAACCACCACCATCACCATCTCCACCAATCCTACGCGCCGCACCACCACTTCTCAACCGCCTCCGTCCAACCCAAATCCGTCGCCGACGAAGACGCCGAAGATTACGGAAATCCGTTCGACGACGACGGCGGGAGCGAGAAGCGAAAGGATCGGGAAGAGATCGGCGACGGAACGACACCGTACGGGTTCAACAAGAGGCCAAAGGCGGCGCCGGTCGCTGGCGGAGGGGGAGGAGAGTACCGGAAGGATCGGGAGGAGTGGAGCGACACGGCGATCGTATGCTTGCTAGAGGCGTACACAGAGAAGTTCACGCAGCTGAATCGGGGGAACCTGAGAGGTAGGGATTGGGAGGAGGTGGCGGCGGTGGTGAGCGAGCGGTGCGAGAACCAGTCGAAGAGCGTGGAGCAGTGCAAGAACAAGGTGGATAACCTGAAGAAGCGGTACAAGCTTGAGAGGCACAGGATGAACAATGGCTGCATCTCCACCAGTCACTGGCCTTGGTTCAAGCAGATGGAACACATCGTCGGAAATTCTCTCCCTGCCAAGTTCACCGATGAGGATAAAGCCCTTGTTCCTGCTTCAAATTCACCCAGGCAAACCAAGAGATATGGAGTGGCAACGCCTAGCAGTGGAGGTCAAGTAAACAGCATGAAGTCGAAAGCATTGTCAAACCTTAGATGGCGGAGGGTAGTGCTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAATATTGACCCTAAGGTGGCCATGTTAGTTTCAAGTGAAGTTGCAATAGCTTCCCGCCTTGGTGTGGAGGTGGCGATTGTTGTAGGAGGTCGTAATTTCTTCTGTGGAGATGCATGGGTAACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTGTGATGAATTCAATATTGCTTCAATCAACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAGTTGCCATGCAAGAATTTGCTGAACCATACAACAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGTATTGGTTTTGGCGCTGGCAATCCACTTTTCTCAACTGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTCAGGCAGTCCTCAAAGGTACTAATGTAGATGGTGTATATGACTGCAACTCCCGAGACAATAATTTTACTTTCGAGCACATATCATTCAGGGAGCTGGCATCCAGAGGTGTCACCTCTATGGATATGTCAGCACTGACATTCTGTGAGGAAAATGCTATTCCTGTTGTGGTTTTTAATCTATTGGCGCCTGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTAGGCACACTAATTGACCAAACTGGAGCAATAAGCTAA 1569 0.5099 MPDQLTEGTLRQTLPHTLSLNAPLSFPNVPDDAVPSNLTVMASCDDDDDFSLLRDDNHHHHHLHQSYAPHHHFSTASVQPKSVADEDAEDYGNPFDDDGGSEKRKDREEIGDGTTPYGFNKRPKAAPVAGGGGGEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERHRMNNGCISTSHWPWFKQMEHIVGNSLPAKFTDEDKALVPASNSPRQTKRYGVATPSSGGQVNSMKSKALSNLRWRRVVLKISGAALTGSDTCNIDPKVAMLVSSEVAIASRLGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSVAMQEFAEPYNRQRAIRHLEKGRVVIFGGIGFGAGNPLFSTDIAAALRASELNAQAVLKGTNVDGVYDCNSRDNNFTFEHISFRELASRGVTSMDMSALTFCEENAIPVVVFNLLAPGNISKALCGEQVGTLIDQTGAIS. 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05366 522 MobiDBLite consensus disorder prediction 249 272 - -
Seca7g05366 522 Gene3D - 278 516 IPR036393 -
Seca7g05366 522 Hamap Uridylate kinase [pyrH]. 281 516 IPR015963 GO:0005737|GO:0006221|GO:0033862
Seca7g05366 522 Pfam Myb/SANT-like DNA-binding domain 140 230 IPR044822 -
Seca7g05366 522 MobiDBLite consensus disorder prediction 61 138 - -
Seca7g05366 522 Gene3D - 143 206 - -
Seca7g05366 522 Coils Coil 183 210 - -
Seca7g05366 522 FunFam Aspartate/glutamate/uridylate kinase family protein 143 206 - -
Seca7g05366 522 CDD AAK_UMPK-PyrH-Ec 284 516 IPR015963 GO:0005737|GO:0006221|GO:0033862
Seca7g05366 522 PANTHER URIDYLATE KINASE 136 521 - -
Seca7g05366 522 SUPERFAMILY Carbamate kinase-like 282 515 IPR036393 -
Seca7g05366 522 MobiDBLite consensus disorder prediction 96 112 - -
Seca7g05366 522 Pfam Amino acid kinase family 285 495 IPR001048 -
Seca7g05366 522 MobiDBLite consensus disorder prediction 248 272 - -
Seca7g05366 522 FunFam Uridylate kinase isoform A 275 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05366 Seca-Chr7 152226731 152231747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05366 127 234 Trihelix Transcription Factor Family AT3G14180 37.838 2.96e-17 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca7g05366 AA_kinase 2.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05366 - - gmx:100805176 823.928