Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05352 ATGGAAATGCCTGCGAGAAGATCCAACTACTCGCTTCTTAGCCAAGTTCCCGATGACCAGTTTTCCGGCGCCGCCGGTGCCACCGGTCCGTCGTCTTCCGGCGACGGAAAAGCTAGTCGAGGCGGCAAGTTGGACCGAGGCTTCGATTGGGAGCTAGTTGGCGATCACAGGGTGGCTCAGCAGGGAAACAATCGGATCGGGAATTTGTACTCTTCGATCGGGTTGCAGAGGCAGTCAAGCGGGAGCAGCTTCGGCGAAAGCTCGCTCTCCGGCGGCGGCGAGTATTACGCACCGATGTTGTCGACGGCGGCCGCTAGCGAGGTTGATACCTTCGGATACCTGCACGACGAGGGATTCAGGGCTAGCGAGGCGAGGAACAAGTTGTCGGAGACTCCGGCGAGGACCGGCGGGTCTTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGTTGCAGCTCGCTCTGGCGCTGCGGCTCTCGTCGGACGCAACGTGCGCCGATGATCCGAATTTCCTGGATCCGGTTCCGGATGAGTCCGCTCCGAGGCTCTCGTCTTCGCCGGAGGCGGTATCGCATAGATTCTGGGTGAATGGCTGCCTATCATACTCTGACAAAATTCCTGATGGCTTTTACCTGATTCATGGGATGGATTCCTATGTCTGGACAGTGTGCACTGATCTGCAGGAAAATGGCCGAATTCCTTCCGTTGATACACTAAAGTCTGTAAATCCCTCCATCGATTCTTCACTTGAAGTAGTTTTGGTGGATCGACGCAGTGACCCCAGCTTAAGAGAGCTACAAAACAGAGTTCATGGCATTTCTTGTAGCAGCATAACACCAACGGAGGTTGTAGATCAGCTTTCCAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTGTTTCTATCTGGAGGGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGTAGTCTGTCTGTTGGCCTGTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCTGACGCCATTGATTTACCTTGTCGGATTGCAAGGGGCTGTAAATATTGCAAAAGAGATGATGCTTCATCTTGTCTTGTTCGATTTGGGCTTGACAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGATACTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACATAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTCGGACTGTCTGTCTCTTGAGCTTGTCTTTGACAACAGTTCTGCAGACCAGTTTGATGGAAAATCCAATGACAGGAATAGCCATAGGCCAATATCAAATGAAAGCAACAGAAGTTCTCACTTTCCTCCACATCCACAAGCTTGTCATCCAAGCACACATGATCAAGGTTCTGAAATATATATATCATGTAACCCTCCTCAAAACATTATAGACTCGACAACAGTGGGCAAGTATCCACCCCCTTTAAAGCATAAGCGTCCTGTTGGTATACAAACCCCGTTAGCACTAGCAAATGCCAATGATGACGTTATTGAGGGTAGGAGATTTGTTGAAGGAAGTCAACTCATTCCTAGCAAAGCTGCTCAAGAGATAGCCCTTGACATGGAGGATTTGAATATACCATGGAGTGATCTTGTGTTAAAAGAGAAAATAGGATCAGGTTCTTTTGGAACGGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAACAAGATTTTCACGTTGAACGCTTCAAGGAATTCCTGAGGGAGGTGTGCTTGAAAGTTCTAACCATGTTTTATGCAGAGAAAAAACTGATTGCTCTTTAG 1911 0.4851 MEMPARRSNYSLLSQVPDDQFSGAAGATGPSSSGDGKASRGGKLDRGFDWELVGDHRVAQQGNNRIGNLYSSIGLQRQSSGSSFGESSLSGGGEYYAPMLSTAAASEVDTFGYLHDEGFRASEARNKLSETPARTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDESAPRLSSSPEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVNPSIDSSLEVVLVDRRSDPSLRELQNRVHGISCSSITPTEVVDQLSKLVCNRMGGSASVGEDDFVSIWRDCSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADAIDLPCRIARGCKYCKRDDASSCLVRFGLDREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLRFPRHKPAEPTIDFRSLAKQYFSDCLSLELVFDNSSADQFDGKSNDRNSHRPISNESNRSSHFPPHPQACHPSTHDQGSEIYISCNPPQNIIDSTTVGKYPPPLKHKRPVGIQTPLALANANDDVIEGRRFVEGSQLIPSKAAQEIALDMEDLNIPWSDLVLKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHVERFKEFLREVCLKVLTMFYAEKKLIAL. 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05352 636 MobiDBLite consensus disorder prediction 1 42 - -
Seca7g05352 636 SUPERFAMILY Protein kinase-like (PK-like) 559 621 IPR011009 -
Seca7g05352 636 ProSiteProfiles Protein kinase domain profile. 573 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05352 636 MobiDBLite consensus disorder prediction 451 498 - -
Seca7g05352 636 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 194 398 - -
Seca7g05352 636 MobiDBLite consensus disorder prediction 124 145 - -
Seca7g05352 636 Pfam Ethylene-responsive protein kinase Le-CTR1 190 395 - -
Seca7g05352 636 ProSitePatterns Protein kinases ATP-binding region signature. 579 600 IPR017441 GO:0005524
Seca7g05352 636 Gene3D Phosphorylase Kinase; domain 1 566 626 - -
Seca7g05352 636 MobiDBLite consensus disorder prediction 128 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05352 Seca-Chr7 151887239 151898156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05352 1 621 MAP Kinase Kinase Kinase AT5G03730 56.857 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Seca7g05352 EDR1 1.5e-81 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05352 K14510 - gmx:100800648 999.193