Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05343 ATGGAAATGGAAGACCACCACCATCAACAATATGGCATGACCACCGATCTCAGGCAACTCGTAAACGCCCCAAGGTCGACCCATTTCCCCTCTATAGTACCGCCACACCCCACCGTGGAGCTTTTTCCCGGTCACCGGAATCTCACACCCTTGGCCTCTCCCCACCACCAACAACACTTTGAGATGATGATGTTCGGTCGTGGACTTCACGACTTTGCTACCACCACCACCGATGCTGCTGCTGCTGCAGTTAGTAATAGTATCTCTACTGTTCCCACTCCTGCAGTTGCTACCACCAGTGCTTCAACTCCTCCACTTAGCGGCTTAGAGGCTGAGACCACACCTTGCATCGGTGGAGACGCCTCCACTGGAAGATGGCCCAGACAAGAGACTCTTACTCTTCTTGAGATCAGATCTCGCCTCGACCCTAAATTCAAAGAAGCTAATCAAAAGGGACCCTTATGGGATGAAGTCTCTAGGATCATGTCTGAAGAGCATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAACCTTTACAAATATTACAAGAAGACAAAAGAAGGTAAGGCAGGAAGACATGATGGGAAGCATTACAGGTTCTTTCGTCAACTTGAAGCCTTATATGGAGAAAACAGTAACAACACACCCTCACTCCCTGCAGAAACCAATTTTGTAAACTGTCTTAATTTCCAGACCCCTTCCCAAACAAATCAAGAATTAATGTTTCAGTCTCATCACAATAAGCATTGTGATAGCCTCAGCCTCACTAACTCCACTGACTTTGCCACATCATCATCTGATGATGATGACAATATTGATCATACTCATACTCATAGCAATGAGAATGACTCCACCAGGAGAAAGAGGAAGAGTAGTGGAAGCAGCTGGAAGGTGAAGATAAAAGAGTTCATTGACTCACAGATGAGGAAGCTTGTGGAGAAGCAAGAGGAGTGGTTGGATAAGATTGTGAAGACACTGGAGGAGAAGGAAAAGGAGAGGATGTTAAGAGAGGAGGAGTGGAGGAAACAAGAGGTGAGCAGGTTAGAGAGAGAGAAAAGGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCAAGGGATGCTGCTCTAATGGAGGCTTTGCAAAATATAACAGGAAGAGATATGAAGGCTGATCATGAGGGTGTAATGCCAGCTCATGAAATTCAAAACCAGAATGAAGATGGAAGTGAAATCTTGAATAGCACTGTCAGAGGTGGTGCTGATAGCTGGCCAGAATCTGAGATCACAAGGCTTCAACAGTTGAGGACTGAGATGGAGACAAGGTTTATTCCACAAAGTGGGGGGTGTTCAGAAGAGGTTACATGGGAGGAGGTAGCAACCAAAATGGCTTGTTTTGGATATGAGAGAACTGCTTTGATGTGCAAGGAGAAATGGGAAAGTATCTGCAACTATCCAAGGGATGCCAATGCCAAGGAAGGTAATAACAAGAAGGGGAAGGAAAATTCTAGAAGTTGTTTTTACTTCAATAGCAATGATCAATCTTCCCTATATAATCAAGGAAGTAGCTATTGTGATCAAAGGCAGGAGATAATTGGGAAGCTGCAAACAAATGATGGTTCTTCACCTTCAAATTCCAATGTTGCTCCTTCTGACAGCTGCTTTCCCTTCTTGATGAGTGAGGGAGGGAATTTGTGGGAGAATTATGGCTTAAAGCTTAGTAAAGCTGCAAGCCAAAACCACTGA 1734 0.4487 MEMEDHHHQQYGMTTDLRQLVNAPRSTHFPSIVPPHPTVELFPGHRNLTPLASPHHQQHFEMMMFGRGLHDFATTTTDAAAAAVSNSISTVPTPAVATTSASTPPLSGLEAETTPCIGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRHDGKHYRFFRQLEALYGENSNNTPSLPAETNFVNCLNFQTPSQTNQELMFQSHHNKHCDSLSLTNSTDFATSSSDDDDNIDHTHTHSNENDSTRRKRKSSGSSWKVKIKEFIDSQMRKLVEKQEEWLDKIVKTLEEKEKERMLREEEWRKQEVSRLEREKRFWAKERAWIEARDAALMEALQNITGRDMKADHEGVMPAHEIQNQNEDGSEILNSTVRGGADSWPESEITRLQQLRTEMETRFIPQSGGCSEEVTWEEVATKMACFGYERTALMCKEKWESICNYPRDANAKEGNNKKGKENSRSCFYFNSNDQSSLYNQGSSYCDQRQEIIGKLQTNDGSSPSNSNVAPSDSCFPFLMSEGGNLWENYGLKLSKAASQNH. 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05343 577 CDD GT1 420 481 - -
Seca7g05343 577 ProSiteProfiles Myb-like domain profile. 118 183 IPR001005 -
Seca7g05343 577 PANTHER FI21293P1 92 549 - -
Seca7g05343 577 FunFam trihelix transcription factor PTL-like 126 188 - -
Seca7g05343 577 CDD GT1 125 190 - -
Seca7g05343 577 MobiDBLite consensus disorder prediction 267 297 - -
Seca7g05343 577 ProSiteProfiles Myb-like domain profile. 419 479 IPR001005 -
Seca7g05343 577 MobiDBLite consensus disorder prediction 271 294 - -
Seca7g05343 577 FunFam Trihelix transcription factor GT-2 420 484 - -
Seca7g05343 577 Gene3D - 420 483 - -
Seca7g05343 577 Gene3D - 126 188 - -
Seca7g05343 577 SMART sant 122 185 IPR001005 -
Seca7g05343 577 SMART sant 416 481 IPR001005 -
Seca7g05343 577 Pfam Myb/SANT-like DNA-binding domain 125 211 IPR044822 -
Seca7g05343 577 Pfam Myb/SANT-like DNA-binding domain 418 509 IPR044822 -
Seca7g05343 577 Coils Coil 316 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05343 Seca-Chr7 151790262 151792850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05343 3 575 Trihelix Transcription Factor Family AT5G03680 44.712 7.22e-142 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca7g05343 Myb_DNA-bind_4 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05343 - - aprc:113870891 765.377