Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05338 ATGATGGCTCAGAAGCACTTGCACGAGCTACTCAAGGAGGATCAAGAACCATTCCTTCTAAAAAACTACATTTCCGACAGGCGCAGCCAGCTGAAAAAAAGGCCTTCCCCAAAAACCACTCTGCAAGTCAAGAAACAAAAACCAACAACAACAACCCTTCATCAAACCTCAAACTCATTATTCCCCATTCACCTCTGCAGAAACGCTTGCTTCCTCTCCTTCCAAAACACAACACCAGACCTCAGAAAATCCCCTCTCTTCGAATTCGCATCCCCAGCAAAGAGCCCCCACAGGTCCTCCAACGCTATCTTCCTCCACATCCCTGCCCGAACAGCTTCTCTTCTCCTCGAAGCCGCTCTCAGGATTCAGAAACACTCAAAGACCAAACCCCACCATAAAAACAACGCCTTTGGGCTATTCGGGTCGTTCTTCAAGAGACTAACGCAACGAGGAAGAAACAGAAGGAATGAAATTGAAGGTGGAAACAACTCAAAGGTCTCTGTGAAGGATATCTTGAGATGGGACTCCTCTGTTGGGAGAAAAAGTACTAAAAGACCTTCCAATGGAAGCAGAAACGTGGTGGAAGAAAACAAGGGTGTTGTAGCTGAGGAAGTGGGGTTCACGTGTTCTTGCAATGGCAGGCCTAGCAGTGCTGTGTGGTCGGAGAGCAACGAGGACAAATCGCTTGACATGGAAACTTCAAGTAGTGGCCACTCTTATGACTCTGTTGAAGAGACAGAGTTTGTGGACAAACAGAAAGAAAACACTGAATGCACTTGCTTCGATGATCACAGCTTCTTCTGTGAAAGCCCTTTTCGTTTTGTTCTCCAAAAAAGCCCCTCCACCTCCTCCGGCCGCCGTACGCCGGAATTTCCCTCTCCGGCGGCTTCACCTACTCGCCACAGGACAGAGGACAAAGAGAGTAATGGAGCTGGTGGAGTCAACAAATTCCAATCAGGGGAAGAAGAGGAAGAGAAGGAACAGTGCAGTCCAGTATCTGTTTTAGACCCACCCTTCGAGGATGATGATGATGGGCATGAAAACGACGATGAAGATGGTGGTTTTGATTTGGAGTGTAGCTATGCCAATGTACAAAGAACTAAGCTGCAGCTATTAGACAGGCTTCGTAGATTTGAGAAACTTGCAGAGTTAGATCCATTAGAGCTTGAGAAAAGAATGCTAGATGAAGAAGACAATGAGTGTGAAACATATATTGAAGATGATGATGACAGTGAAACATCATGTGAAGAGAAGGCCTTGAGAGAATTAATCTATGAAATCCTGTGTGTTCATGACAGAAGGGAAGCCCCAGAAGACCTTAAGAGACTAGTTTATGATCTCATTGTGGAGGAAGAGAAAGGACTTAATTCATCAGAAGATAGGAACATGGTGATGAGAAGGGTTTGCAGGAGGCTGGAAATGTGGAAAGAAGTGGAATCCAACACCATTGATATGATGATAGAAGAGGACTTCTCTAAAGAGGAAAGTGGGTGGAAGAAAAATGCTGAGCAGACAATGGCGCTGGCTGGGGAACTTGAACTTGCTATATTTTGCTTTCTAGTGGAGGAATTTTCAGAGGAATTAGTATGTTAA 1593 0.4532 MMAQKHLHELLKEDQEPFLLKNYISDRRSQLKKRPSPKTTLQVKKQKPTTTTLHQTSNSLFPIHLCRNACFLSFQNTTPDLRKSPLFEFASPAKSPHRSSNAIFLHIPARTASLLLEAALRIQKHSKTKPHHKNNAFGLFGSFFKRLTQRGRNRRNEIEGGNNSKVSVKDILRWDSSVGRKSTKRPSNGSRNVVEENKGVVAEEVGFTCSCNGRPSSAVWSESNEDKSLDMETSSSGHSYDSVEETEFVDKQKENTECTCFDDHSFFCESPFRFVLQKSPSTSSGRRTPEFPSPAASPTRHRTEDKESNGAGGVNKFQSGEEEEEKEQCSPVSVLDPPFEDDDDGHENDDEDGGFDLECSYANVQRTKLQLLDRLRRFEKLAELDPLELEKRMLDEEDNECETYIEDDDDSETSCEEKALRELIYEILCVHDRREAPEDLKRLVYDLIVEEEKGLNSSEDRNMVMRRVCRRLEMWKEVESNTIDMMIEEDFSKEESGWKKNAEQTMALAGELELAIFCFLVEEFSEELVC. 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05338 530 PANTHER OS04G0572500 PROTEIN 2 528 - -
Seca7g05338 530 MobiDBLite consensus disorder prediction 279 355 - -
Seca7g05338 530 MobiDBLite consensus disorder prediction 35 54 - -
Seca7g05338 530 Coils Coil 387 407 - -
Seca7g05338 530 MobiDBLite consensus disorder prediction 29 54 - -
Seca7g05338 530 MobiDBLite consensus disorder prediction 215 248 - -
Seca7g05338 530 MobiDBLite consensus disorder prediction 337 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05338 Seca-Chr7 151671730 151675024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05338 1 340 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 46.499 1.00e-64 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05338 - - gmx:100814311 589.726