Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05337 | ATGGACTTGCAGCTGAAGCAATGGAAAAACCAGTATGAGTCAGAGCAACAACATTCTACAAAGAAACCAAAATTTCTACCTGAACCCCATCAACAGCCACAATCTCCTGCCTCTGCATTCCCTTTGTTTGTACCTGAAATCAACAGCAAAGTCAGCACCCTGTCATCCTTATCTGATTCAACCTTAGCTGCTGTTACCAGATTTCCCAGAATGGGGAGTTATTTCAGCTTTGCACAATGGCAGGAGCTTGAGTTGCAGGCTTTGATATTCAGATACATGTTAGCTGGTGCTGCTGTTCCTCCTGAGCTTCTTCAACCCATCAAGAAAAGCACTCTTCCTTCCACTTCATATTTCCTCCAACACCCTCTTCAACACTATCACCCTCATTTGTTGCAATCAGGGTACTGGGGAAGAGGAGCCATGGATCCAGAGCCTGGCCGGTGCCGGAGGACCGACGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTGGCGGGTCAGAAGTACTGCGAGCGCCACATGCATCGTGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCAATACCAACTAGTGCCACTGGTGCTGATGGTGGATCTCATTCTCTTGGTGCTACAACTTCCATTTCTTCACCCTCTATAGCAGCTTCCTCATTCAAATCCCCATTTGATCTCCTTCACCTCAATGAACGTAGTTCCTCTGGGATTAAGAATGATAGCAAGAGCTTGTTTGAAAACAAAGATCATGTGGATGGGGATGACAGATCTAATGGCCATATCCTGAGGCATTTCTTTGATGATTGGCCTCGTGGTGAAAGCAATGCTGGCAGGATCAACTCATCAGTTACTTGCCTCTCTATTTCAACGCCTTCCTCTGATGTGTCATTGAAATTGTCCACTGGCTACAGAGAGGAACAATGCCCAAGAAATGAGAATGTGGAGGCACAGCAGCAACTGCAGTTGAACTGGGCGGAAGGGTGGAGATCAGCTACTCAATTGGCTTCCATGGGAGGACCACTTGCAGAGGCATTGAGATCATCCACCCCAACTTCATCACAAACAAGTGTACTTCTTCAATTGCCTCTTAGTTCTGCATCTGAACTAGCTTCCTTAGCGCCTAGATTTGGTTAA | 1128 | 0.4725 | MDLQLKQWKNQYESEQQHSTKKPKFLPEPHQQPQSPASAFPLFVPEINSKVSTLSSLSDSTLAAVTRFPRMGSYFSFAQWQELELQALIFRYMLAGAAVPPELLQPIKKSTLPSTSYFLQHPLQHYHPHLLQSGYWGRGAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPIPTSATGADGGSHSLGATTSISSPSIAASSFKSPFDLLHLNERSSSGIKNDSKSLFENKDHVDGDDRSNGHILRHFFDDWPRGESNAGRINSSVTCLSISTPSSDVSLKLSTGYREEQCPRNENVEAQQQLQLNWAEGWRSATQLASMGGPLAEALRSSTPTSSQTSVLLQLPLSSASELASLAPRFG. | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05337 | 375 | MobiDBLite | consensus disorder prediction | 240 | 255 | - | - | |
Seca7g05337 | 375 | MobiDBLite | consensus disorder prediction | 174 | 204 | - | - | |
Seca7g05337 | 375 | ProSiteProfiles | WRC domain profile. | 142 | 186 | IPR014977 | - | |
Seca7g05337 | 375 | PANTHER | GROWTH-REGULATING FACTOR 5 | 32 | 291 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Seca7g05337 | 375 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Seca7g05337 | 375 | SMART | QLQ_2 | 73 | 109 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Seca7g05337 | 375 | Pfam | QLQ | 75 | 107 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Seca7g05337 | 375 | ProSiteProfiles | QLQ domain profile. | 74 | 109 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Seca7g05337 | 375 | MobiDBLite | consensus disorder prediction | 235 | 255 | - | - | |
Seca7g05337 | 375 | Pfam | WRC | 143 | 185 | IPR014977 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05337 | Seca-Chr7 | 151621768 | 151624244 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g05337 | 1 | 363 | GRF Transcription Factor Family | AT3G52910 | 50.000 | 5.22e-92 | 279 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GRF | Seca7g05337 | WRC | 2.3e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05337 | - | - | gmx:100814842 | 458.759 |