Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05334 ATGGGTTCGTTCTCTGGAACTTGTGAAATTGTTGAAGCAAGGGAAGACCTAAATACAGGGAAAGATGCAGGGATATTTCTACCCAATTCTGGATATAGTGTGGCTGAGAAAAATCAGAAGCTTCCTGTGCTGAAACTGGGATACAAGGATAACCTACATGATGATATTAATAAGCTGTTTGAATCAATTACTCTCAAATCTTCATCAAGGGATTCGGCCGTTTTACAAGATGGAACAAGCCCTAAGATGAAAAGTGCACTAAAAAAGCCAATTACAGTGGGTGTTCCTCGGTCCCCACGAGTTGGGACTTCTGAGCCGGTGACTTTGAAGCAGGCACTAAGAGACCTATGTATATCCAAGGCATCAGAAATGGCTGCTATGAAAAGATTATCAAAGTCAACAGCTTCTCCTAGAATATCTGAGGTTGGGAAGATACAGACATTGTATAATTCAGTTGTAGCTGAAGCTAGACGGTCTGGGCCTTCAAATGTTTCGAGCAAAGGGAGTACAATTGAAATATCTCTAGTTCCAGAAGAAAGCAAGTCACTTTCCTTGAATAAAGAATCCCAGTCTCATCAAACAGCCAGAAGCACATCATTGAGCCAAAATGTTCATTCTTCCAAAATTGCTGTTGCAACTACACAAAATGATACTGGGGCTTCATTGATGCAAAGTGATTTGCCATGTTCATCAAGTAAAGTTGGGGTTCCATCACAGCCTGCTCAAATAGAAAAACAAACAACTCCATCTTCTCCATCTAGTTGTATCACCAATGGAAGTAAATTAGAGTTTCCTGAAAATGCTTCCTCACCTAAAAAAATAGGAAATAAAGCATCTGCGTCAAAGAATGGGCGGAAAGGTAGGTTACAAACAGCATCTTCCTCATCTACTTCAGTAAATGGAAATAGAGTGTGCAAACTGTCACGCAATGGCCCCCGTACAGTCAAATCAGTCATCAAGAACAAGAATTTGGGCAAGAAGAAAGTAAAGCAGGATTCTGTTTCTGCATTATTTGATCCTCCATCCAATAAAGTAAATAACAAGCCAGTTCCTGGTACAACTCCACTTGTTTGTGAGAGATGTTGGTGTGCTATAGAAAATACAAACACAGAAAACAGCAAAGGTATTATAACATCAGAATCTATCAGGCCTGCAAATGGAATAAACTCAAGTAATGCGCACTCTGCCTCAGCATCAACTGGCTGTAATAGCAGCCGAGAAGTTACAAAAGTGAAAAAGAACACCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAAAGTAGCCAAGGTGATTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGTCAGTGGATCTACTTGTGGCAATAGACCTCACATGTCAAAGGATGCTAGATGGGAAGCCATACAACATGCTCAAATACAACATGGAGTCTTGGGCTTGAGACACTTTAATCTTTTGAAGAAGCTTGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCAAAAATTGTTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAGAGAAATTTTAAGGATGCTGGATCATCCTTTTCTTCCAACTCTGTATGCACAGTTTACATCAGATAATCTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGACAGAAGCAGCTTGGCAGAAGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTCGCTTTGGAGTACTTGCACATGCTTGGTGTTGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTTCGAGAAGACGGCCACATTATGCTCACAGATTTTGATCTGTCACTGAGGTGTGATGTTAGCCCAACGCTTTTGAAATCATCTGATGTGGATCCTGCTAAGATTTCTGGTCCTTGTGCACAATCGAGTTGCATTGAGCCATTCTGCATTGAACCACCATGTCAAGTTCCATGCTTCAGCCCTAGGTTCTTACCCCCTGCGGCAAAAGCTAGGAAATTAAAAGCTGACCTTGCTGCTCAGATCAGATCATTGCCACAGCTCGTGGCCGAGCCCACGGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACCTAGCGCCTGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTTTATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACATTAGCCAACGTGGTGTTGCAAGGTCTCAGATTCCCTGACAGCCCATTTGTTAGTTTCCAAGCGAGGGATCTCATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAACCGCTTGGGTTCAGAGAAAGGGGCTGCCGAGATTAAACAGCATCCCTTCTTCGAGGGCCTTAATTGGGCCTTAATACGTTGTGCTATCCCACCGGAAATTCCAGACCTTTGTGAGTTTGTAGTTTCAGACATGACCCCACAGTCACAAGGCAAAAGCGGTAAGTATTTAGAGTATACAGCAACTGGAGAACAAGTGGAATTTGAGTTGTTTTAA 2598 0.4169 MGSFSGTCEIVEAREDLNTGKDAGIFLPNSGYSVAEKNQKLPVLKLGYKDNLHDDINKLFESITLKSSSRDSAVLQDGTSPKMKSALKKPITVGVPRSPRVGTSEPVTLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVAEARRSGPSNVSSKGSTIEISLVPEESKSLSLNKESQSHQTARSTSLSQNVHSSKIAVATTQNDTGASLMQSDLPCSSSKVGVPSQPAQIEKQTTPSSPSSCITNGSKLEFPENASSPKKIGNKASASKNGRKGRLQTASSSSTSVNGNRVCKLSRNGPRTVKSVIKNKNLGKKKVKQDSVSALFDPPSNKVNNKPVPGTTPLVCERCWCAIENTNTENSKGIITSESIRPANGINSSNAHSASASTGCNSSREVTKVKKNTRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSTCGNRPHMSKDARWEAIQHAQIQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGKNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSDVDPAKISGPCAQSSCIEPFCIEPPCQVPCFSPRFLPPAAKARKLKADLAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDSPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPEIPDLCEFVVSDMTPQSQGKSGKYLEYTATGEQVEFELF. 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05334 865 MobiDBLite consensus disorder prediction 272 307 - -
Seca7g05334 865 ProSiteProfiles Protein kinase domain profile. 481 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05334 865 MobiDBLite consensus disorder prediction 181 205 - -
Seca7g05334 865 MobiDBLite consensus disorder prediction 219 316 - -
Seca7g05334 865 Pfam Protein kinase domain 709 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05334 865 Pfam Protein kinase domain 482 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05334 865 SUPERFAMILY Protein kinase-like (PK-like) 461 839 IPR011009 -
Seca7g05334 865 MobiDBLite consensus disorder prediction 387 408 - -
Seca7g05334 865 Gene3D Phosphorylase Kinase; domain 1 479 560 - -
Seca7g05334 865 FunFam serine/threonine-protein kinase D6PK-like 565 632 - -
Seca7g05334 865 Gene3D Transferase(Phosphotransferase) domain 1 561 629 - -
Seca7g05334 865 FunFam serine/threonine-protein kinase D6PK-like 707 830 - -
Seca7g05334 865 MobiDBLite consensus disorder prediction 387 458 - -
Seca7g05334 865 Gene3D Transferase(Phosphotransferase) domain 1 705 830 - -
Seca7g05334 865 PANTHER FLIPPASE KINASE 1-RELATED 221 834 - -
Seca7g05334 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Seca7g05334 865 SMART serkin_6 481 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05334 865 FunFam Serine/threonine-protein kinase D6PK-like 479 564 - -
Seca7g05334 865 MobiDBLite consensus disorder prediction 420 454 - -
Seca7g05334 865 CDD STKc_phototropin_like 479 831 - -
Seca7g05334 865 MobiDBLite consensus disorder prediction 219 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05334 Seca-Chr7 151606361 151610910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05334 1 865 AGC Kinase Gene Family AT2G36350 51.351 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca7g05334 Pkinase 4.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05334 - K08286 gmx:100813470 1415.98