Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05319 ATGATGGAGTTTCACAAGCAACTGTTGTTTTCCCTCTTATGTCTTTCCCTAGTACTCTCAGGACAAATGAGGCTGCTAGCTCAGGCTCGCCCGCACCATCATCATCAGCACAATTATCCTTCAAAAAAATTGTTCGTTTTTGGGGACTCATATGCTGATACGGGCAACACTAGAAAAAATTCACCTGGCTCATGGAAAATACCGTATGGCATTACCTTTCCCGGAAAACCCGCCGGAAGATTCTCCGATGGTAGAGTCCTAACTGACTTCATTGCTAAATATTTGGGACTGAGATCTCCACTCCCCTACAAGTTCAGGAAAGTGATGCCTCAGTATTTGAAGTACGGAATGAACTTTGCTTATGGTGGAACAGGTGTATTCAATACATCCTCTTCAAACCCAAATATGACAATCCAGATCGATTTCTTCAACCACCTCATCCAAGAAAACGTGTTCACTCCCTCAGATCTCACCAATTCCGTGGCTCTCGTTTCCGTCGCTGGAAATGACTACAATTTTTACCTGGCCACAAATGGCTCTGCCCAGCAGGGATTCCCTTCTTTCATCGCCTCAGTGGTTAATCAAACAACTACTAACTTGATTCGGCTCCAAAAGTTAGGAGTGAAGAAAATTGTTGTGGGTGGTTTACAACCCCTTGGTTGCCTTCCTCTCATCACAGCCCCATCCTCGTTCCAGCGTTGCAATAGCACCTTTAACGAACTCGTAGTTCTCCATAACAACCTGTTGAACCAATCCGTTACCAAGTTGAACCAACAAAGCAAGGATCACACCACCTTCGTAATTCTTGACCTTTACGACAGTTTCATGTCAGTGCTTAACGACCCATCGATCAATAACATTAAGGACCAATTCAATCCGTGCTGCGTTGGGGTAAGCAGCAAGTATTCGTGTGGGAGCGTGGAGAACAACGTGAAGAAATATACGGTTTGCGAAAATCCTGAATCAGCTTTCTTTTGGGATATGTTTCACCCAACGCAACAAGGTTGGAATGCTGTCTATAACAAACTTCACAAGGGAGATCTTCATCAACTTCAATACTAG 1062 0.4416 MMEFHKQLLFSLLCLSLVLSGQMRLLAQARPHHHHQHNYPSKKLFVFGDSYADTGNTRKNSPGSWKIPYGITFPGKPAGRFSDGRVLTDFIAKYLGLRSPLPYKFRKVMPQYLKYGMNFAYGGTGVFNTSSSNPNMTIQIDFFNHLIQENVFTPSDLTNSVALVSVAGNDYNFYLATNGSAQQGFPSFIASVVNQTTTNLIRLQKLGVKKIVVGGLQPLGCLPLITAPSSFQRCNSTFNELVVLHNNLLNQSVTKLNQQSKDHTTFVILDLYDSFMSVLNDPSINNIKDQFNPCCVGVSSKYSCGSVENNVKKYTVCENPESAFFWDMFHPTQQGWNAVYNKLHKGDLHQLQY. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05319 353 SUPERFAMILY SGNH hydrolase 40 343 - -
Seca7g05319 353 Pfam GDSL-like Lipase/Acylhydrolase 44 342 IPR001087 GO:0016788
Seca7g05319 353 CDD SGNH_plant_lipase_like 44 347 IPR035669 -
Seca7g05319 353 Gene3D SGNH hydrolase 29 345 IPR036514 -
Seca7g05319 353 PANTHER OSJNBB0059K02.9 PROTEIN 16 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05319 Seca-Chr7 151328790 151332033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05319 36 339 Pollen Coat Proteome AT1G75930 28.308 6.70e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05319 - - gmx:100800932 492.271