Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05316 ATGGCGGAAGAACATCGATGCGAAGCTCCCGAAGGCCACCGACTCTGCGCCAACAACTGCGGCTTCCTCGGTAGCCCAGCCACCATGAATCTCTGCTCCAAATGCTACGGTGACATACGTTTGAAGGAACAAGAAGAAGCATCTACCAAATCCACCATTGAAACCGCTCTCTCTTCTGCCTCCTCCTCCGTCGCGTCGGCGGCGGCGGCTATCGCATCGCCGCCGCCGTCCACGTCATCTCCGTCGACGGCTGCTGTTGAATCAGTCAAATCTCTCCCTCCTCCGGCGGCGTTGACGGAGGTCGCGTCGAGCTCTGTGGCTGCTCCTCCGGTTCAACCGAACCGGTGCGCGTCGTGCAGGAAGCGCGTGGGATTGATGGGGTTCAAGTGCAGGTGCGGGGTCACTTTTTGTGGGGCCCACAGGTACCCGGAGAGGCACGCGTGCAGCTTCGACTTTAAGACGGTGGGACGAGAGGAAATTGCTCGGGCAAACCCTATGATCAGAGCGGAGAAGCTGCAGAGGATTTGA 528 0.5947 MAEEHRCEAPEGHRLCANNCGFLGSPATMNLCSKCYGDIRLKEQEEASTKSTIETALSSASSSVASAAAAIASPPPSTSSPSTAAVESVKSLPPPAALTEVASSSVAAPPVQPNRCASCRKRVGLMGFKCRCGVTFCGAHRYPERHACSFDFKTVGREEIARANPMIRAEKLQRI. 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05316 175 Gene3D - 1 82 - -
Seca7g05316 175 MobiDBLite consensus disorder prediction 68 91 - -
Seca7g05316 175 SUPERFAMILY AN1-like Zinc finger 104 170 IPR035896 -
Seca7g05316 175 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 175 - -
Seca7g05316 175 Pfam AN1-like Zinc finger 116 152 IPR000058 GO:0008270
Seca7g05316 175 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Seca7g05316 175 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Seca7g05316 175 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Seca7g05316 175 ProSiteProfiles Zinc finger AN1-type profile. 110 156 IPR000058 GO:0008270
Seca7g05316 175 SMART AN1_Zf_4 116 153 IPR000058 GO:0008270
Seca7g05316 175 FunFam Zinc finger AN1-type containing 6 93 171 - -
Seca7g05316 175 Gene3D - 93 171 IPR035896 -
Seca7g05316 175 MobiDBLite consensus disorder prediction 68 87 - -
Seca7g05316 175 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05316 Seca-Chr7 151263357 151263884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05316 1 175 C2H2 Transcription Factor Family AT3G52800 52.841 1.77e-55 171