Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05308 ATGGTGGTGGCAGAATCTGAGATGAAGTTTCAAGTTGAAGTGGATTCAGGTCAGCAAGAAGGCAACAAGAACCATCAAATCTCATCACTTGGAAGACAAGCCTCAATATACTCACTCACCCTTGATGAGTTCCAGCACACTCTCTGTGAAGGTGGCAAGAATTTTGGGTCCATGAACATGGATGAGTTCCTCACCAGCATTTGGAGCGCTGAAGAGAGTCAAGCCATAAACTCCAACATTTACAGTAACAACAATTTGGGTTTGAGTGAAACCTCAACAGAGAAAGTGATAAGGAAACAACCAAGTCTCTCAAAACAGGGGTCTCTGACAATTCCTGCACCTTTGTATAGGAAAACAGTGGAGGAGGTTTGGTCTGAGATACACAAAGGACAACAATCTCAGCAACAACAGAGTGAAAATGTTCGGAATACCGAATCTGTCCCTCGCCAATCAACTTTTGGAGAGATGACTTTGGAGGATTTTTTGGTCAAAGCAGGGGTAGTTCAGGAACCAAGTGCAACAATGCCTCTCCAAGCTTCTGCTACTGCTGCTGCTGTTTCTGCTTCTTCTCTTCATCATCACCAGCTGCAGCAGCAGCAGCAACAACAGTATGGGATGTATACAAATAACAACCTTGCAGTGGGACCCTCTTCTTTTGTTGCTAGGACTGTGATGGGAGGAGGGAATGTGGTTGCGCCTACTTACCAGGCGGTGGCTCAGGGTGGTGGTGTGATTGGAGGGAGGGTGGTGAATGGTGGAGGGGGTGGTTTTGGGAGTAACATGGGAGTGGCGGCGGCGCCGGTGAGCCCGGTTTCACCGGATGGTGGGTTGGGTGGAGGTGAAAACGTTGGTGTTGGTGGTCAATTTGGGATGGAGATGGGAGTGTTGAGGGGAAGGAAGAGGATGTTGGATGGTCCTGTGGAAAAGGTGGTGGAGAGGAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCTGCAAGATCTAGAGCAAGGAAACAGGCATACACAGTTGAATTGGAAGCAGAATTGAACCAATTAAAAGAAGAGAACGCCCAACTTAAACTAGCTCTGGCCGAGCTTGAGAGGAGAAGAAAGCAACAGAATTTAGAGGAAGTGAACGGGAGATCAGTTGAAACAAGCGCTGAGAGGGTCGAGAAGAATTTGATAGCATTGAAAAGGAACAGAAGTTGCCCTTTATTATAA 1203 0.473 MVVAESEMKFQVEVDSGQQEGNKNHQISSLGRQASIYSLTLDEFQHTLCEGGKNFGSMNMDEFLTSIWSAEESQAINSNIYSNNNLGLSETSTEKVIRKQPSLSKQGSLTIPAPLYRKTVEEVWSEIHKGQQSQQQQSENVRNTESVPRQSTFGEMTLEDFLVKAGVVQEPSATMPLQASATAAAVSASSLHHHQLQQQQQQQYGMYTNNNLAVGPSSFVARTVMGGGNVVAPTYQAVAQGGGVIGGRVVNGGGGGFGSNMGVAAAPVSPVSPDGGLGGGENVGVGGQFGMEMGVLRGRKRMLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKLALAELERRRKQQNLEEVNGRSVETSAERVEKNLIALKRNRSCPLL. 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05308 400 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 311 363 IPR004827 GO:0003700|GO:0006355
Seca7g05308 400 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 361 IPR043452 GO:0003700|GO:0045893
Seca7g05308 400 MobiDBLite consensus disorder prediction 127 149 - -
Seca7g05308 400 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 316 331 IPR004827 GO:0003700|GO:0006355
Seca7g05308 400 Gene3D - 311 367 - -
Seca7g05308 400 SMART brlzneu 309 370 IPR004827 GO:0003700|GO:0006355
Seca7g05308 400 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 311 367 - -
Seca7g05308 400 CDD bZIP_plant_BZIP46 313 367 - -
Seca7g05308 400 Pfam bZIP transcription factor 313 365 IPR004827 GO:0003700|GO:0006355
Seca7g05308 400 Coils Coil 329 375 - -
Seca7g05308 400 SUPERFAMILY Leucine zipper domain 313 363 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05308 Seca-Chr7 151193843 151195871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05308 1 367 bZIP Transcription Factor Family AT2G36270 49.057 2.12e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g05308 bZIP_1 4.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05308 K14432 - gmx:100790948 407.527