Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05297 ATGGAAGACTCTATGGGTGAAGGAGACTATGTGAATCATGAGAACAATACAGAAGAGGGATGCGAAGGTATATCAAGCAGCAATGTGGGCAATGGTAATGATGTTGACAATGAAAATGGTGGTGTAGAGGGTGAAGGTGAAGACACGGAAGAAGAAGGAGATGAAGAAGATGATTATGATGAATATAAAATTGATAATGGTGCAGATATAAAAAGGGTTGAGTTTATTGGCCTAGGGAACGAGAAGTTCAAAATGTACTACTTTAGGAGTCGATTGGTAGCATTTGAATTCTATAATGCGTATGCTAAGAAAATGGGATTTGCTGCTAGAAGATGGAATGTCCTGAAAAACAAAAAAAGAGAAGTAACGCAGCAGGAATTTGTGTGCTTCAAGGAGGGATTTCGTGACAAGAAACACTTAGAGAGGGAAGATCGGAAGCGAGAGCCGAGAGCAATGACTAGGTCTTATGGTAGGAATGAAAGTGATGATAATAGTTTGGGTGTTGGTGATCCTGTGAGGGTTCGGACAAAAGGATGTGGATCAAGACAAGAAACATCAAGGAGAAAAGGTGAGAGAAAGGCTAATTGTTGTAGTGTTTGTCAACGGCCGGGCCATAATAAGAAAACGTGCCCTGAACAAATTCAGAGACGGGAAGGTTCGACATCCGGACTAAGGGATGACAATCACAATACAGATGATGAAATGATGGATGTGTAA 717 0.41 MEDSMGEGDYVNHENNTEEGCEGISSSNVGNGNDVDNENGGVEGEGEDTEEEGDEEDDYDEYKIDNGADIKRVEFIGLGNEKFKMYYFRSRLVAFEFYNAYAKKMGFAARRWNVLKNKKREVTQQEFVCFKEGFRDKKHLEREDRKREPRAMTRSYGRNESDDNSLGVGDPVRVRTKGCGSRQETSRRKGERKANCCSVCQRPGHNKKTCPEQIQRREGSTSGLRDDNHNTDDEMMDV. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05297 238 MobiDBLite consensus disorder prediction 18 35 - -
Seca7g05297 238 MobiDBLite consensus disorder prediction 209 238 - -
Seca7g05297 238 Pfam FAR1 DNA-binding domain 96 154 IPR004330 -
Seca7g05297 238 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 155 - -
Seca7g05297 238 MobiDBLite consensus disorder prediction 180 195 - -
Seca7g05297 238 MobiDBLite consensus disorder prediction 1 16 - -
Seca7g05297 238 MobiDBLite consensus disorder prediction 1 61 - -
Seca7g05297 238 SUPERFAMILY Retrovirus zinc finger-like domains 178 217 IPR036875 GO:0003676|GO:0008270
Seca7g05297 238 MobiDBLite consensus disorder prediction 40 61 - -
Seca7g05297 238 MobiDBLite consensus disorder prediction 140 157 - -
Seca7g05297 238 MobiDBLite consensus disorder prediction 140 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05297 Seca-Chr7 151077766 151081385 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g05297 FAR1 8.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05297 - K17604 adu:110280242 88.1965