Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05290 ATGGAGAGGGTGAAGCATGTAGCTCGAACTGCCCATGCAGATGAGTTTATTAAAAAACTTCCAGAAGGATACAAAACCAAGATTGGACCAAGGGGCTCTACTTTAAGCGGAGGCCAGAGGCAAAGGCTGGCTATTGCAAGGGCTTTCTACCAAAATCCTTCAATATTAATTCTGGATGAGGCAACTTCTGCCTTGGATAGTAAATCTGAGTTATTAGTGAGACAAGCTGTAGAGCTTTTGATGGAAAATCGCACAGTGCTTGTGATCTCCCATCGCTTGGAAACAGTTTTGATGGCTAAACGAATATTCCTTTTGGATAATGGAAAGCTAGAAGAGCTGCCTCGATCAACTATGTTGAACGGGCACATGACTTCATTGCTCTCATCTGGGCTTGTTATTTGA 402 0.4303 MERVKHVARTAHADEFIKKLPEGYKTKIGPRGSTLSGGQRQRLAIARAFYQNPSILILDEATSALDSKSELLVRQAVELLMENRTVLVISHRLETVLMAKRIFLLDNGKLEELPRSTMLNGHMTSLLSSGLVI. 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05290 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 113 IPR027417 -
Seca7g05290 133 Gene3D - 2 112 IPR027417 -
Seca7g05290 133 Pfam ABC transporter 10 63 IPR003439 GO:0005524
Seca7g05290 133 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 2 112 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05290 Seca-Chr7 150987967 150989461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05290 6 122 Calmodulin-binding Proteins AT2G36910 48.305 2.72e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05290 K02021 - gmx:100788075 224.557