Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05253 ATGAAGCTTCCTTCTCTTCTCCTCAAGAACACAAATGTAAGATCCTCTCCTTCATGGGCCTGGCCATATTGCCACCAACCAAAAACCCTTTCTTTCAGAGCCAACAACGACGTCGTATTCAAAACCATTAACTCAGCCTACTTAGACGCCGCGGAAGAAAGCCCCGAATCGTTTTTCACCGAATCTCCCGTTTCCGCGAGCTTCTCAACGGCTTCGGAAGAAGATTCTAGAGACTTAATCGAGACAGTTATTACTCACGGTTTGCGTTCGGATCGGCTTTTCTTCGAGCCAGATGAGACCAGCTCCATAGTAGAGGCCAAAGCTTATTCTGGAACCTTCTTCCCATTCAAAGACAGCGCCGTTGTGCTGTCGATGGATTCACGTGACCCTTACGTGGATTTCAAAAAGTCCATGGAGGAGATGGTTGAGTCTCATGGCGTCAACGATTGGGAGGGTCTCGAGGAGCTTTTGTGTTGGTATCTTAAGGTCAACGGGAAAATCAATCACGGTTATATTGTTAGCGCTTTTGTTGATTTATTAGTTGGTTTAGCATTTGCTTCAGCTACTACTACTACAGGTTCTTCATCTCCTTCTTCTCCTTTATCGTTTGATAGTTCTTCTTCTTGTAGCACTCGTTGTGTTTCGTGTTTAGAAGGTGAACAGGTGGAGCTTGACGATGCTCCTTATTCTTATTCACCTTCTCTGTTAGAACAAGTTAAGGAAGAGATTACAGTACTTGAAGACTCTTCCTCTTCTTCTTCAAACGCATGA 771 0.4449 MKLPSLLLKNTNVRSSPSWAWPYCHQPKTLSFRANNDVVFKTINSAYLDAAEESPESFFTESPVSASFSTASEEDSRDLIETVITHGLRSDRLFFEPDETSSIVEAKAYSGTFFPFKDSAVVLSMDSRDPYVDFKKSMEEMVESHGVNDWEGLEELLCWYLKVNGKINHGYIVSAFVDLLVGLAFASATTTTGSSSPSSPLSFDSSSSCSTRCVSCLEGEQVELDDAPYSYSPSLLEQVKEEITVLEDSSSSSSNA. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05253 256 NCBIfam uncharacterized plant-specific domain TIGR01568 122 184 IPR006458 -
Seca7g05253 256 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 68 183 IPR038933 GO:0045892
Seca7g05253 256 ProSiteProfiles OVATE domain profile. 123 182 IPR006458 -
Seca7g05253 256 Pfam Transcriptional repressor, ovate 127 183 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05253 Seca-Chr7 150480695 150481465 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca7g05253 Ovate 7.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05253 - - gmx:100803791 251.521