Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05252 | ATGTCTGGCTCCAGAAGAAAGCTAGTTTTGAACTCTGTTTCCGTGAACCTTGGCTGTGGAACCTGCAGAAGACGACCAAAGCTTGGTTTCATATTCAACCCAAAGCCTAAGCCCAAGAACCCCACCTATAAAAAACACAAGCTTTACTCACATTCTTCCGAAGACAGAGATGACTCTGCCACCAGCACCACTACCCCAACCACTAACACCACATTCTCTCCTTGCTACGTTGATTCCTCACAGTTTTGTGACTATGAAAAGTCCTCAGGGACCGTCAAAGGATTCGGAAGAGTTGGAAGTGAAGGCGTGGCTGTAGAGAAAGATTCTGATGACCCTTATCTGGATTTCAGGCAATCCATGCTTCAAATGATATTGGAGAATGAGATATACTCAAAGGATGATCTTAGGGAGCTTCTGAATTGCTTTCTTCAGCTGAATTCACCGGAACACCATGGTATTATTGTCAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTGAGGTCCAGTTCACCCAGGTTCCACCTGAACCATAAGTCACGTGACTTCTAG | 555 | 0.4541 | MSGSRRKLVLNSVSVNLGCGTCRRRPKLGFIFNPKPKPKNPTYKKHKLYSHSSEDRDDSATSTTTPTTNTTFSPCYVDSSQFCDYEKSSGTVKGFGRVGSEGVAVEKDSDDPYLDFRQSMLQMILENEIYSKDDLRELLNCFLQLNSPEHHGIIVRAFTEIWNGVFSVRSSSPRFHLNHKSRDF. | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05252 | 184 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 103 | 163 | IPR006458 | - | |
Seca7g05252 | 184 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 49 | 167 | IPR038933 | GO:0045892 | |
Seca7g05252 | 184 | ProSiteProfiles | OVATE domain profile. | 105 | 164 | IPR006458 | - | |
Seca7g05252 | 184 | MobiDBLite | consensus disorder prediction | 30 | 67 | - | - | |
Seca7g05252 | 184 | Pfam | Transcriptional repressor, ovate | 109 | 165 | IPR006458 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05252 | Seca-Chr7 | 150455865 | 150456419 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Seca7g05252 | Ovate | 1.8e-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05252 | - | - | pvu:PHAVU_007G269800g | 239.965 |