Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05252 ATGTCTGGCTCCAGAAGAAAGCTAGTTTTGAACTCTGTTTCCGTGAACCTTGGCTGTGGAACCTGCAGAAGACGACCAAAGCTTGGTTTCATATTCAACCCAAAGCCTAAGCCCAAGAACCCCACCTATAAAAAACACAAGCTTTACTCACATTCTTCCGAAGACAGAGATGACTCTGCCACCAGCACCACTACCCCAACCACTAACACCACATTCTCTCCTTGCTACGTTGATTCCTCACAGTTTTGTGACTATGAAAAGTCCTCAGGGACCGTCAAAGGATTCGGAAGAGTTGGAAGTGAAGGCGTGGCTGTAGAGAAAGATTCTGATGACCCTTATCTGGATTTCAGGCAATCCATGCTTCAAATGATATTGGAGAATGAGATATACTCAAAGGATGATCTTAGGGAGCTTCTGAATTGCTTTCTTCAGCTGAATTCACCGGAACACCATGGTATTATTGTCAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTGAGGTCCAGTTCACCCAGGTTCCACCTGAACCATAAGTCACGTGACTTCTAG 555 0.4541 MSGSRRKLVLNSVSVNLGCGTCRRRPKLGFIFNPKPKPKNPTYKKHKLYSHSSEDRDDSATSTTTPTTNTTFSPCYVDSSQFCDYEKSSGTVKGFGRVGSEGVAVEKDSDDPYLDFRQSMLQMILENEIYSKDDLRELLNCFLQLNSPEHHGIIVRAFTEIWNGVFSVRSSSPRFHLNHKSRDF. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05252 184 NCBIfam uncharacterized plant-specific domain TIGR01568 103 163 IPR006458 -
Seca7g05252 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 49 167 IPR038933 GO:0045892
Seca7g05252 184 ProSiteProfiles OVATE domain profile. 105 164 IPR006458 -
Seca7g05252 184 MobiDBLite consensus disorder prediction 30 67 - -
Seca7g05252 184 Pfam Transcriptional repressor, ovate 109 165 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05252 Seca-Chr7 150455865 150456419 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca7g05252 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05252 - - pvu:PHAVU_007G269800g 239.965