Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05242 ATGGCTTTTATGGTCTTATACTTGCATGAAGGGTGGGAAGCCAAAGTAGTGCATAGGGACATTAAGGCTAGCAATGTGTTGTTGGATAAGGATATGAATGGAAGGCTTGGAGATTTTGGGTTAGCCTGA 129 0.4264 MAFMVLYLHEGWEAKVVHRDIKASNVLLDKDMNGRLGDFGLA. 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05242 42 ProSiteProfiles Protein kinase domain profile. 1 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05242 42 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Seca7g05242 42 SUPERFAMILY Protein kinase-like (PK-like) 5 42 IPR011009 -
Seca7g05242 42 PANTHER - 2 42 - -
Seca7g05242 42 Pfam Protein kinase domain 7 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05242 42 Gene3D Transferase(Phosphotransferase) domain 1 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05242 Seca-Chr7 150262274 150262402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05242 5 42 Receptor kinase-like Gene Family AT3G55550 78.947 5.35e-18 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g05242 Pkinase 2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05242 - - gmx:100794861 85.5001