Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05241 ATGGGAGAGAGGTTGCTAAAAAGGGTGAAAGAATTTTTGCTAGAAAAGGTGCTAACTTTTGAGGTAGGATGGTTTGACCAAGAGGAGAACTCAAGTGCAGCAATTTGTGCACATTTGGCAACTGAAGCCAACTTGGTTAGATCCCTTGTTGCAGAAAGAATTTCATTGTTAGTTCAGATTTCGGTCACAGCTACAAAAGCTTTTGTACTTGGTTTAATTGTTTCATGGAGGGTGACTATTATCATGATTGGTATGCAGCCTTTGATCATTGCATGTTTATACTCAAAAAGCATTCTCATGAAAAGTATGTCAAGCAAAGCAAGAAGTGCTCAAAGAGAGGGTACTCAATTTGAAGGGAATCAATCATGTAGTCAGGGTGCAGCGGAAATAAATGGATTCCCTCCCTTTAATATTTGGTTATAA 423 0.3853 MGERLLKRVKEFLLEKVLTFEVGWFDQEENSSAAICAHLATEANLVRSLVAERISLLVQISVTATKAFVLGLIVSWRVTIIMIGMQPLIIACLYSKSILMKSMSSKARSAQREGTQFEGNQSCSQGAAEINGFPPFNIWL. 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05241 140 SUPERFAMILY ABC transporter transmembrane region 1 113 IPR036640 GO:0005524|GO:0016020
Seca7g05241 140 Gene3D ABC transporter type 1, transmembrane domain 1 116 IPR036640 GO:0005524|GO:0016020
Seca7g05241 140 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 111 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Seca7g05241 140 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 112 IPR039421 -
Seca7g05241 140 Pfam ABC transporter transmembrane region 1 109 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05241 Seca-Chr7 150260007 150260429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05241 1 119 Calmodulin-binding Proteins AT2G36910 39.496 6.91e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05241 K05658 - gmx:100804664 169.088