Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05239 ATGTCTCATTTGAACGGCGCCTACTACGGCCCCTCCGTTCCGCCGCCACCAAAATCCTACCACCGCCCAAGCCGGGGCGGCAGCTGCTGCGGCGGCTGCTTCAGTTGTTGCTGCGGCTGCATCTTCAATTGCATCTTCAGCATCCTCTGCAAAATCTTAACCACCATCCTCATCATCGTGGCCATCGTCGCTCTTCTCTTCTGGTTCATCGTGCGCCCTAACGTGGTCAAATTCCGCGTGACTGATGCATCGCTCACTCAATTCACCTACACCAATAACACGCTCCACTACAATCTCGATCTAAACATCACGATCCGCAACCCTAACAGGAGGGTCGGCATCTACTACGACTACATCGAAGCGAACGCGTTTTACCAGGATGTGAGGTTCAGTTCCCAGACGTTGGGGAACTTTTTCCAGCACCACAAGAACACTAGCGTGTTGAGCCCTGTGTTTAAAGGGCAACAGGTGATGCCCCTCGGAGAAGACCAGACTAAGGAGCTGAATAAGGACAAGAGTGATTCGGTTTACCATATCGATGTGAAGCTGTTTCTTAATGTGAGGTTCAAGTTGGGTTTGTTTAAGAGCGGAACGGCCAAGCCCAAGGTTCGTTGTGACTTGCAGGTTCCCCTGAAATCACACAACGGAACCTCGTCGATCACTGGATTTCAGGCCACCGAATGCGATTGGGATTACAAATGGATGCGGATCTTTTAG 717 0.5146 MSHLNGAYYGPSVPPPPKSYHRPSRGGSCCGGCFSCCCGCIFNCIFSILCKILTTILIIVAIVALLFWFIVRPNVVKFRVTDASLTQFTYTNNTLHYNLDLNITIRNPNRRVGIYYDYIEANAFYQDVRFSSQTLGNFFQHHKNTSVLSPVFKGQQVMPLGEDQTKELNKDKSDSVYHIDVKLFLNVRFKLGLFKSGTAKPKVRCDLQVPLKSHNGTSSITGFQATECDWDYKWMRIF. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05239 238 Pfam Late embryogenesis abundant protein 102 205 IPR004864 -
Seca7g05239 238 PANTHER OS05G0367900 PROTEIN 47 214 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05239 Seca-Chr7 150226379 150227095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05239 70 222 SNARE and Associated Proteins AT1G32270 40.260 3.03e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05239 - - aprc:113873272 333.183