Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05235 ATGGCCGACAAGCAACCCCAACTGAACGGTGCCTACTACGGACCTTCCATTCCTCCGGCGGATCAACCTCGCCACCACCACCGCGGAAGAAGATGCTGTTGTTGCCTCTTCGGCATCATCTGGAAGCTCCTCTTGGTAATCATCATCTTCATTGTCCTCGTATTCATCATCTTCTGTGCCATCGTTCAACCCCGGGCCTTCAGGTTCAACGTCACGGAAGCCAAACTCACTCAATTCAACTACACCAACAACCACATCCTAAACTACAACCTCGTCCTCAACTTCACGGCACGTAACCCAAACAAAAAACTGAACATCTACTATGACCAAGTGGAGGCGCACGCATACTACGAGGGAAGCAGGTTCGATTTAACGGACGTGATAACGTGGAAGAACTCGTTCCGGCAATACACGAAGAGCACGGATCGCATGAGTGGTGTTTTCTCTGGGCAACAAGTTGTGGTGTTTGATCAGGATCAGGTCTCTGTTTTCGAACGAGACAAGAGAGTGAAGCTCTACTTCAGGATTAGGTTCAGGCTTGGTGACTTCATAGCTGGAACTACAAAGGCCAAGGCCAAATGCGAGCTTAACGTTCCTTTACGTTCTAATGGAACAGCCGTGACTGTCTTTATGCCCACCAACATGGCTGAGGCTGACAACAAACAACAACCAGAATTGAACCCTGCAAGTGCAAACTACGACCCCTCTATTCCACCAGCGGAACAACCGCGCCACCGTGGCAGAAGATGCTCATGCTGTTGCTGTCTCTTTCGCATCTTGTGGTGGTTTCTCGTCTCCATCATCGTCCTCGTTTGCATCGTGATCCTTGTCTTGTGGATCCTCATCCAACCCCGCTCCTTCAAATATCACGTGACAGAAGCCAAACTCACCCAATTCAACTACACAGCCAGCAACACCCTCCGCTACAACCTCGTCGTCAACTTCACTGTCCGCAACCCAAACAAAAAGCTCAAGATCTACTACGATGTGGCGGAAGCCAACGCTTTCTATGAGGGCTCTAATTTCTCCGCAACAGACGTGATCATGCCTTGGCGCTCCTACCTCCAGAACACCAAGAGCACTGACCGCATGAGCGCTGTTTTCTCGGGCCAGCGCGTGATGGTGCTCGATCACAATGAGTTTGACGAAGACAAAAAGATTGGGGCTTTCCCTATCCATATCAAGCTCTACTTCGGGATTAGGTTCAGGCTTGGTGACTTCACACACCACTCCGGCATGAAGCCCAAGGGCAAATGTGCGCTTAAGGTTCCTTTCCGTTCTAATGGAACAACCATGACTGCGTTTAAGACCACCAAGTGCGAAGTCAATTTCTGA 1335 0.5011 MADKQPQLNGAYYGPSIPPADQPRHHHRGRRCCCCLFGIIWKLLLVIIIFIVLVFIIFCAIVQPRAFRFNVTEAKLTQFNYTNNHILNYNLVLNFTARNPNKKLNIYYDQVEAHAYYEGSRFDLTDVITWKNSFRQYTKSTDRMSGVFSGQQVVVFDQDQVSVFERDKRVKLYFRIRFRLGDFIAGTTKAKAKCELNVPLRSNGTAVTVFMPTNMAEADNKQQPELNPASANYDPSIPPAEQPRHRGRRCSCCCCLFRILWWFLVSIIVLVCIVILVLWILIQPRSFKYHVTEAKLTQFNYTASNTLRYNLVVNFTVRNPNKKLKIYYDVAEANAFYEGSNFSATDVIMPWRSYLQNTKSTDRMSAVFSGQRVMVLDHNEFDEDKKIGAFPIHIKLYFGIRFRLGDFTHHSGMKPKGKCALKVPFRSNGTTMTAFKTTKCEVNF. 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05235 444 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 220 431 - -
Seca7g05235 444 Pfam Late embryogenesis abundant protein 95 194 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05235 Seca-Chr7 150156825 150165720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05235 281 434 SNARE and Associated Proteins AT1G32270 30.573 1.27e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05235 - - gmx:100788062 254.603