Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05199 | ATGAACAACACAACTGATACCTCTGGATTCCTTGGTTCCAACAACATAAGTGGCTTTGGCTATGGCATAGGAATTTCAATTGGAATTCTCTTGCTCATTACAACCATCACACTCACTTCCTACTTCTGCACCAGGGTTCAGATGCCAACTGCTCCACCTCCTAGGAGAACCACTACCCCTGAATTCCTTGAGCCACAGCACTCAGTAATCGATGTGGGACTAGATGAAGCCACAATTCTGAGTTACCCAAAGATGCTATATTCTGAAGCCAAGCTAATTAGGAAATCTGATTCCACAGCAACATGCTGCTCTATATGTCTGGGAGATTACAAGGGCTCTGATATGCTTCGTGTGTTGCCTGATTGTGAGCATCTCTTCCACCTTAAGTGCATAGACCCTTGGTTGAGGCTGCATCCTACCTGTCCTCTCTGCAGAACATCTCCAATGCCAACACCACTCTCAACTCCTCTGGCTGAAGTTGTTCCATTAGCAAGCAGGAGAGATTAA | 507 | 0.4576 | MNNTTDTSGFLGSNNISGFGYGIGISIGILLLITTITLTSYFCTRVQMPTAPPPRRTTTPEFLEPQHSVIDVGLDEATILSYPKMLYSEAKLIRKSDSTATCCSICLGDYKGSDMLRVLPDCEHLFHLKCIDPWLRLHPTCPLCRTSPMPTPLSTPLAEVVPLASRRD. | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05199 | 168 | CDD | RING-H2_EL5-like | 102 | 145 | - | - | |
Seca7g05199 | 168 | SMART | ring_2 | 103 | 144 | IPR001841 | - | |
Seca7g05199 | 168 | FunFam | E3 ubiquitin-protein ligase ATL6 | 63 | 150 | - | - | |
Seca7g05199 | 168 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 62 | 150 | IPR013083 | - | |
Seca7g05199 | 168 | ProSiteProfiles | Zinc finger RING-type profile. | 103 | 145 | IPR001841 | - | |
Seca7g05199 | 168 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 159 | IPR045899 | - | |
Seca7g05199 | 168 | Pfam | Ring finger domain | 103 | 145 | IPR001841 | - | |
Seca7g05199 | 168 | SUPERFAMILY | RING/U-box | 102 | 150 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05199 | Seca-Chr7 | 149628740 | 149630168 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g05199 | 6 | 165 | C3H Transcription Factor Family | AT2G35910 | 63.804 | 5.87e-60 | 184 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05199 | - | - | gmx:121172638 | 237.269 |