Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05186 | ATGGGAAACAACTGTGTTGGATCGAGAACCTCTACTTTTCCAAGTTCATTCTGGTGGTCACGTACAAAGAAGAAAGAGGCTTCTCGTGCACACAAAGAAGTAGCTGTGAGCAAAAACTCAAAAGCTACAGAACATGTTCAACGCAAGCCTCCACAGGTAGTTAAAATTGACAAGGAGGAGTTGAAGACACAATCCAAAGAGACTACTAAATCACCTTCAGAATCTATAGTTGCTACAGGAGAGCCTGCAAAACCAAAGAGACCCCACAATGTGAAGAGGCTAGCAAGTGCAGGGCTCAAAGCAGATTCTGTTTTGCAGAGGAAAACGGGTAGTCTTAGGGAGTATTATAATCTTGGACAGAAACTAGGACAAGGGCAATTTGGAACTACTTTCCTTTGTGTGGAGAAAACTACTGGGAAAGAGTATGCTTGCAAGTCCATCTTGAAGAGGAAATTGCTGACAGATGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCACCACTTGGCTGGGAGTCCTAATGTGATATCCATTAAGGAGGCTTATGAGGATGCTGTTGCTGTTCATGTTGTCATGGAATTGTGTGCCGGGGGTGAACTGTTCGATAGGATTGTGGAAAGAGGACATTACACAGAAAGAAAAGCAGCTAAACTTGCAAGGACTATAGTAGGTGTTATTGAGTCTTGTCACTCCCTTGGAGTAATGCATCGTGATCTTAAGCCTGAGAATTTCCTTTTCGTCAATGAGCAAGAAGATTCCCCCCTCAAGGCAATAGATTTTGGACTGTCTGCTTTTTTCAAACCAGGTTTGTCAAGAATTTCAATTCTTTCTTCAATATGTGAAATTTTCAACGATGTGGTAGGAAGTCCTTATTATGTTGCACCTGAAGTTCTACGCAAGCATTATGGTCCAGAAGCAGATGTCTGGAGTGCTGGTGTTATTATATATATTCTCTTATGTGGGGTGCCTCCATTTTGGGGTGAATCGGAGCAAGAGATATTTGAGGCGATTTTGCATGGTGATCTTGATTTCACATCAGATCCTTGGCCTAGTATCTCTGAAAGTGCAAAAGACTTGGTTAGGAAGATGCTTGTCAGAGATTCTAGTAAACGGATGACAGCTTTTGACGTTCTTCGTCACCCCTGGATTCAGGTTGATGGAGCAGCCCCAGACAAGCCTCTTGATTCTGCAGTTTTGACTCGCCTGAAGCAGTTTACTGCAATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTATCTGAAGAAGAAATTGCTGGATTGAAAGAAATGTTTAAGATGATAGACACGGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAAGTTGGACTGAAAAAATTTGGTGCTAATCTCAATGAATCTGAAATTTATGATCTCATGCAAGCGGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTAAACAAAGTTGACAGGGAAGATCATTTAATTGCAGCTTTCTCATATTTTGATAAAGATGGAAGTGGCTATATCACTCAAGATGAGCTTCAAAAAGCTTGTGAAGAATTTGGCATAGTGGATGTCCCCTTGGAGGAAATGATCCGAGAAGCTGATCAGGATAATGATGGACGAATAGACTACAGTGAATTTGTGGCTATGATGCAGGGTAAGAGGGGCAGAAAGGGTAGCACTAGTTTTAGAATTGGATTTAGGGAGGTACTACCAGTATGTTAA | 1761 | 0.414 | MGNNCVGSRTSTFPSSFWWSRTKKKEASRAHKEVAVSKNSKATEHVQRKPPQVVKIDKEELKTQSKETTKSPSESIVATGEPAKPKRPHNVKRLASAGLKADSVLQRKTGSLREYYNLGQKLGQGQFGTTFLCVEKTTGKEYACKSILKRKLLTDEDVEDVRREIQIMHHLAGSPNVISIKEAYEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNEQEDSPLKAIDFGLSAFFKPGLSRISILSSICEIFNDVVGSPYYVAPEVLRKHYGPEADVWSAGVIIYILLCGVPPFWGESEQEIFEAILHGDLDFTSDPWPSISESAKDLVRKMLVRDSSKRMTAFDVLRHPWIQVDGAAPDKPLDSAVLTRLKQFTAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKKFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKVDREDHLIAAFSYFDKDGSGYITQDELQKACEEFGIVDVPLEEMIREADQDNDGRIDYSEFVAMMQGKRGRKGSTSFRIGFREVLPVC. | 587 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05186 | 586 | Gene3D | - | 410 | 567 | - | - | |
Seca7g05186 | 586 | SMART | efh_1 | 538 | 566 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | SMART | efh_1 | 468 | 496 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | SMART | efh_1 | 432 | 460 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | SMART | efh_1 | 504 | 532 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | CDD | STKc_CAMK | 116 | 384 | - | - | |
Seca7g05186 | 586 | ProSiteProfiles | Protein kinase domain profile. | 116 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05186 | 586 | CDD | EFh | 433 | 492 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 464 | 499 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 500 | 535 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | MobiDBLite | consensus disorder prediction | 28 | 89 | - | - | |
Seca7g05186 | 586 | ProSitePatterns | EF-hand calcium-binding domain. | 513 | 525 | IPR018247 | - | |
Seca7g05186 | 586 | SUPERFAMILY | Protein kinase-like (PK-like) | 114 | 386 | IPR011009 | - | |
Seca7g05186 | 586 | SUPERFAMILY | EF-hand | 424 | 564 | IPR011992 | - | |
Seca7g05186 | 586 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 539 | 569 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | Pfam | EF-hand domain pair | 504 | 564 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | ProSitePatterns | EF-hand calcium-binding domain. | 441 | 453 | IPR018247 | - | |
Seca7g05186 | 586 | FunFam | Calcium-dependent protein kinase 1 | 393 | 567 | - | - | |
Seca7g05186 | 586 | MobiDBLite | consensus disorder prediction | 28 | 67 | - | - | |
Seca7g05186 | 586 | FunFam | Calcium-dependent protein kinase SK5 | 202 | 397 | - | - | |
Seca7g05186 | 586 | Pfam | EF-hand domain pair | 445 | 495 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | ProSitePatterns | EF-hand calcium-binding domain. | 547 | 559 | IPR018247 | - | |
Seca7g05186 | 586 | CDD | EFh | 504 | 564 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | ProSitePatterns | EF-hand calcium-binding domain. | 477 | 489 | IPR018247 | - | |
Seca7g05186 | 586 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 236 | 248 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g05186 | 586 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 201 | - | - | |
Seca7g05186 | 586 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 428 | 463 | IPR002048 | GO:0005509 | |
Seca7g05186 | 586 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 104 | 559 | - | - | |
Seca7g05186 | 586 | ProSitePatterns | Protein kinases ATP-binding region signature. | 122 | 149 | IPR017441 | GO:0005524 | |
Seca7g05186 | 586 | SMART | serkin_6 | 116 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05186 | 586 | Pfam | Protein kinase domain | 116 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05186 | 586 | FunFam | Calcium-dependent protein kinase 1 | 118 | 201 | - | - | |
Seca7g05186 | 586 | Gene3D | Transferase(Phosphotransferase) domain 1 | 202 | 409 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05186 | Seca-Chr7 | 149461975 | 149466764 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g05186 | 1 | 564 | EF-hand Containing Proteins | AT5G04870 | 68.729 | 0.0 | 828 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Seca7g05186 | Pkinase | 3e-71 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05186 | K13412 | - | gmx:100783079 | 976.852 |