Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05186 ATGGGAAACAACTGTGTTGGATCGAGAACCTCTACTTTTCCAAGTTCATTCTGGTGGTCACGTACAAAGAAGAAAGAGGCTTCTCGTGCACACAAAGAAGTAGCTGTGAGCAAAAACTCAAAAGCTACAGAACATGTTCAACGCAAGCCTCCACAGGTAGTTAAAATTGACAAGGAGGAGTTGAAGACACAATCCAAAGAGACTACTAAATCACCTTCAGAATCTATAGTTGCTACAGGAGAGCCTGCAAAACCAAAGAGACCCCACAATGTGAAGAGGCTAGCAAGTGCAGGGCTCAAAGCAGATTCTGTTTTGCAGAGGAAAACGGGTAGTCTTAGGGAGTATTATAATCTTGGACAGAAACTAGGACAAGGGCAATTTGGAACTACTTTCCTTTGTGTGGAGAAAACTACTGGGAAAGAGTATGCTTGCAAGTCCATCTTGAAGAGGAAATTGCTGACAGATGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCACCACTTGGCTGGGAGTCCTAATGTGATATCCATTAAGGAGGCTTATGAGGATGCTGTTGCTGTTCATGTTGTCATGGAATTGTGTGCCGGGGGTGAACTGTTCGATAGGATTGTGGAAAGAGGACATTACACAGAAAGAAAAGCAGCTAAACTTGCAAGGACTATAGTAGGTGTTATTGAGTCTTGTCACTCCCTTGGAGTAATGCATCGTGATCTTAAGCCTGAGAATTTCCTTTTCGTCAATGAGCAAGAAGATTCCCCCCTCAAGGCAATAGATTTTGGACTGTCTGCTTTTTTCAAACCAGGTTTGTCAAGAATTTCAATTCTTTCTTCAATATGTGAAATTTTCAACGATGTGGTAGGAAGTCCTTATTATGTTGCACCTGAAGTTCTACGCAAGCATTATGGTCCAGAAGCAGATGTCTGGAGTGCTGGTGTTATTATATATATTCTCTTATGTGGGGTGCCTCCATTTTGGGGTGAATCGGAGCAAGAGATATTTGAGGCGATTTTGCATGGTGATCTTGATTTCACATCAGATCCTTGGCCTAGTATCTCTGAAAGTGCAAAAGACTTGGTTAGGAAGATGCTTGTCAGAGATTCTAGTAAACGGATGACAGCTTTTGACGTTCTTCGTCACCCCTGGATTCAGGTTGATGGAGCAGCCCCAGACAAGCCTCTTGATTCTGCAGTTTTGACTCGCCTGAAGCAGTTTACTGCAATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTATCTGAAGAAGAAATTGCTGGATTGAAAGAAATGTTTAAGATGATAGACACGGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAAGTTGGACTGAAAAAATTTGGTGCTAATCTCAATGAATCTGAAATTTATGATCTCATGCAAGCGGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTAAACAAAGTTGACAGGGAAGATCATTTAATTGCAGCTTTCTCATATTTTGATAAAGATGGAAGTGGCTATATCACTCAAGATGAGCTTCAAAAAGCTTGTGAAGAATTTGGCATAGTGGATGTCCCCTTGGAGGAAATGATCCGAGAAGCTGATCAGGATAATGATGGACGAATAGACTACAGTGAATTTGTGGCTATGATGCAGGGTAAGAGGGGCAGAAAGGGTAGCACTAGTTTTAGAATTGGATTTAGGGAGGTACTACCAGTATGTTAA 1761 0.414 MGNNCVGSRTSTFPSSFWWSRTKKKEASRAHKEVAVSKNSKATEHVQRKPPQVVKIDKEELKTQSKETTKSPSESIVATGEPAKPKRPHNVKRLASAGLKADSVLQRKTGSLREYYNLGQKLGQGQFGTTFLCVEKTTGKEYACKSILKRKLLTDEDVEDVRREIQIMHHLAGSPNVISIKEAYEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNEQEDSPLKAIDFGLSAFFKPGLSRISILSSICEIFNDVVGSPYYVAPEVLRKHYGPEADVWSAGVIIYILLCGVPPFWGESEQEIFEAILHGDLDFTSDPWPSISESAKDLVRKMLVRDSSKRMTAFDVLRHPWIQVDGAAPDKPLDSAVLTRLKQFTAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKKFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKVDREDHLIAAFSYFDKDGSGYITQDELQKACEEFGIVDVPLEEMIREADQDNDGRIDYSEFVAMMQGKRGRKGSTSFRIGFREVLPVC. 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05186 586 Gene3D - 410 567 - -
Seca7g05186 586 SMART efh_1 538 566 IPR002048 GO:0005509
Seca7g05186 586 SMART efh_1 468 496 IPR002048 GO:0005509
Seca7g05186 586 SMART efh_1 432 460 IPR002048 GO:0005509
Seca7g05186 586 SMART efh_1 504 532 IPR002048 GO:0005509
Seca7g05186 586 CDD STKc_CAMK 116 384 - -
Seca7g05186 586 ProSiteProfiles Protein kinase domain profile. 116 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05186 586 CDD EFh 433 492 IPR002048 GO:0005509
Seca7g05186 586 ProSiteProfiles EF-hand calcium-binding domain profile. 464 499 IPR002048 GO:0005509
Seca7g05186 586 ProSiteProfiles EF-hand calcium-binding domain profile. 500 535 IPR002048 GO:0005509
Seca7g05186 586 MobiDBLite consensus disorder prediction 28 89 - -
Seca7g05186 586 ProSitePatterns EF-hand calcium-binding domain. 513 525 IPR018247 -
Seca7g05186 586 SUPERFAMILY Protein kinase-like (PK-like) 114 386 IPR011009 -
Seca7g05186 586 SUPERFAMILY EF-hand 424 564 IPR011992 -
Seca7g05186 586 ProSiteProfiles EF-hand calcium-binding domain profile. 539 569 IPR002048 GO:0005509
Seca7g05186 586 Pfam EF-hand domain pair 504 564 IPR002048 GO:0005509
Seca7g05186 586 ProSitePatterns EF-hand calcium-binding domain. 441 453 IPR018247 -
Seca7g05186 586 FunFam Calcium-dependent protein kinase 1 393 567 - -
Seca7g05186 586 MobiDBLite consensus disorder prediction 28 67 - -
Seca7g05186 586 FunFam Calcium-dependent protein kinase SK5 202 397 - -
Seca7g05186 586 Pfam EF-hand domain pair 445 495 IPR002048 GO:0005509
Seca7g05186 586 ProSitePatterns EF-hand calcium-binding domain. 547 559 IPR018247 -
Seca7g05186 586 CDD EFh 504 564 IPR002048 GO:0005509
Seca7g05186 586 ProSitePatterns EF-hand calcium-binding domain. 477 489 IPR018247 -
Seca7g05186 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Seca7g05186 586 Gene3D Phosphorylase Kinase; domain 1 118 201 - -
Seca7g05186 586 ProSiteProfiles EF-hand calcium-binding domain profile. 428 463 IPR002048 GO:0005509
Seca7g05186 586 PANTHER SERINE/THREONINE-PROTEIN KINASE 104 559 - -
Seca7g05186 586 ProSitePatterns Protein kinases ATP-binding region signature. 122 149 IPR017441 GO:0005524
Seca7g05186 586 SMART serkin_6 116 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05186 586 Pfam Protein kinase domain 116 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05186 586 FunFam Calcium-dependent protein kinase 1 118 201 - -
Seca7g05186 586 Gene3D Transferase(Phosphotransferase) domain 1 202 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05186 Seca-Chr7 149461975 149466764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05186 1 564 EF-hand Containing Proteins AT5G04870 68.729 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca7g05186 Pkinase 3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05186 K13412 - gmx:100783079 976.852