Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05177 ATGTATGTTGCAGCGGAGGATATTGAAGCTGGTGGAACTAAGACAAAGTTTCAAACAGAACCTACTCTGCCCATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGCTCAAAGGCATGACAACAACTGAGGAGAAGGATATCCTGAATGGGATCACTGGTTCTGTAAATCCAGGTGAAGTTTTGGCATTGATGGGTCCCTCTGGAAGTGGAAAGACAACTCTTTTGAATCTTCTTGGAGGAAGGATAAGTCAGCCAACAATTGGTGGTTCTATCACTTACAATGACCAATCATATTCCAAGTTCCTCAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTCTCTTTCCTCACCTAACTGTTAAAGAGACATTGACGTATGCAGCCAGGCTAAGACTTCCAAAGACATTCACAAAAGAGCAAAAGGAAAAGAGAGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGTGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTGCAAGACATAGCAGAGGCTGGTAAAACTGTGGTGACAACAATCCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCTATGAATTATTTCCAATCTATAGGATGTACACCTCTTATTTCCATGAACCCTGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCGTGCCTTCAGAATTGGAGGATAAAGTGCAAATGGGAAATGCAGTAGCTGAAACACATAATGGGAAACCATCACCAGCAGTTGTACATGAGTATCTGGTGGAGGCATATGAAGATCGAGTTGCAGAAACAGAAAAGAAGAAAATAATGGTTTCCATCCCCCTTGATGAATCACTGAAGTCTAAAGTAAGTTCTAAAAGACAATGGGGAGCAAGTTGGAATGAGCAATTTTCCATATTATTTTGGAGAGGAATCAAAGAAAGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCAATCATCTTAGGATTACTCTGGTGGCAATCAGATACTAAGACCCCAAAAGATCTACAAGATCAGGCAGGATTGCTTTTCTTCATTGCTGTCTTCTGGGGATTCTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGAACAAAGAAAGGGCAGCAGATATGTACAGATTAAGTGCATACTTCCTTGCTAGAACTACAAGTGACCTTCCACTAGACTTGATACTACCAGTACTTTTTCTCATTGTGGTTTATTTCATGGCTGGTCTGAGACTGAGTGCAGCTCCTTTTTTCCTCACCATTCTTACTGTTTTCCTCTGCATTGTGGCAGCTCAGGGACTTGGACTTGCTATTGGGGCTACACTCATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAGAGTGCCCATATTCATTTCTTGGATCCGCTACATGTCATTCAACTACCACACCTACAAACTTTTGCTCAAGGTGCAATATGAACACACTACGGCTAGCCATAGCTTAATTGGGGTCAAAATTGATGGTGGTTTAACAGAGGTGGCTGCTCTGATTGTCATGGTTTTTGGTTACCGCTTCTTGGCATATCTTTCTTTGCGGCGGATGAAACTTCAATCTTGA 1869 0.4173 MYVAAEDIEAGGTKTKFQTEPTLPIYLKFTDVTYKIVLKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRISQPTIGGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIGCTPLISMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAVAETHNGKPSPAVVHEYLVEAYEDRVAETEKKKIMVSIPLDESLKSKVSSKRQWGASWNEQFSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDTKTPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLIVVYFMAGLRLSAAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFISWIRYMSFNYHTYKLLLKVQYEHTTASHSLIGVKIDGGLTEVAALIVMVFGYRFLAYLSLRRMKLQS. 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05177 622 Pfam ABC transporter 50 201 IPR003439 GO:0005524
Seca7g05177 622 FunFam ABC transporter G family member 22 37 267 - -
Seca7g05177 622 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Seca7g05177 622 CDD ABCG_EPDR 24 255 - -
Seca7g05177 622 Gene3D - 26 268 IPR027417 -
Seca7g05177 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 612 - -
Seca7g05177 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 266 IPR027417 -
Seca7g05177 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 273 IPR003439 GO:0005524
Seca7g05177 622 SMART AAA_5 59 250 IPR003593 GO:0016887
Seca7g05177 622 Pfam ABC-2 type transporter 367 576 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05177 Seca-Chr7 149372852 149377667 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05177 49 302 Calmodulin-binding Proteins AT2G36910 28.846 3.64e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05177 K05681 - gmx:100800934 1111.29