Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g05173 | ATGGGCAACAACTGTGTGGGACCAAACCTCGGCGGGAATGGCTTCCTTCAATCCGTTTCGGCTGCGGTGTGGAAAACCCGCGCACCGGAGGCTAGTCTTCCGCCGCCTAACGCCGACGACAAGAACAAATCTCCGGCACCAGCGAATGCGGCCAGCGATTCGTCCAATGGAGGAGGGTCGAGTGCTGCCGGCAAAGGTTCGGATGCTTCTAATAACAATCGCTCTGACGGTTCCAGAGGCGTTGATCCTGCAATGCCGGTTCAGAGCACACCGCCTGAACAGGTGAAAATAACCGCCACGGAAACAAAACCGGAGAAGCCGCAGGTAAATAACGAACCGGCATCTAGCGCTGGTGGTGGTGGTGGTGATGCAGGGAAAGCTAAGAAACCTACTCATGTGAAAAGGGTATCTAGTTTTGGACTTCAAGTGGAATCTGTGTTGGGTAGGAAAACAGAGAATATGAAGGATTTTTACAGTTTGGGGAGGAAGCTTGGGCAAGGGCAATTTGGGACAACTTTCCTTTGTGTGGAGAAGGGGACTAACAAAGATTTTGCTTGTAAATCCATTGCAAAGAGGAAATTGACCACACAGGAGGATGTTGAGGATGTTAGGAGGGAAATTCAGATCATGCACCACTTGGCTGGTCACCCCAATGTGATACAAATAATTGGTGCTTATGAGGATGCAGTTGCTGTCCATGTTGTTATGGAGCTCTGTGCTGGTGGGGAGCTATTTGACAGGATCATACAGAGGGGGCATTACACTGAGAGAAAGGCTGCTGAACTTGCGAGATTGATAGTCAGTGTTGTTGAGGCTTGCCATTCTTTAGGTGTCATGCATAGGGACTTGAAGCCAGAAAATTTTCTCTTCATCAACCATGAAGAAGAATCACCACTTAAGACAATAGATTTTGGACTCTCGGTTTTCTTTAGACCAGGTGAAACATTTACTGATGTGGTTGGGAGTCCGTACTATGTGGCCCCTGAAGTTTTGCGGAAGCAATATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATTTATATCTTACTCAGTGGAGTTCCCCCATTTTGGGACGAAACGGAGCAGGGAATATTTGAGCAAGTATTGAGAGGAGAGCTTGACTTTGTTTCTGAACCATGGCCAAGCATATCTGAAAGTGCTAAGGATCTTGTTCGAAGAATGCTTATAAGGGACCCTAAGAAGCGGTTGACAGCACATGAAGTTCTTTGCCACCCTTGGGTTCAGGTTGGAGGTGTTGCTCCTGATAAACCGCTTGATTCTGCTGTCTTAACTCGTTTGAAGCAATTCTCTGCAATGAACAAGCTAAAAAAAATAGCCATTCGAGTAATTGCTGAAAGTCTGTCTGAGGAGGAAATTGCAGGACTGAAAGAAATGTTCAAGATGATAGACACAGATAATAGCGGACAGATCACTCTTGAGGAACTGAAAAATGGTTTAGAGAGAGTGGGTTCCGTTCTTAAGGATTCTGAAATTAACTGGTTAATGCAAGCGGCAGACGTTGATAACAGTGGTACCATAGACTACGGTGAATTCATAGCGGCAATGCTTCATCTAAACAAGATCCAGAAGGAGGATCATCTATTTGCAGCCTTCTCCTACTTTGATAAAGATGGTAGTGGATACATTACAAAGGACGAGCTCCAACAAGCCTGTGAACAGTTTGGCTTAAAAGATTATCATCTAGATGATATAATACGCGAAGTTGATCGGGATAATGTAATATATTGCATTCCAGTAGTTTACTATGATGGACGCATTGATTACAGTGAGTTTGTTGCAATGATGGAAGACACTGGTTTTGGCAGAAAGGGGTTATAA | 1845 | 0.4531 | MGNNCVGPNLGGNGFLQSVSAAVWKTRAPEASLPPPNADDKNKSPAPANAASDSSNGGGSSAAGKGSDASNNNRSDGSRGVDPAMPVQSTPPEQVKITATETKPEKPQVNNEPASSAGGGGGDAGKAKKPTHVKRVSSFGLQVESVLGRKTENMKDFYSLGRKLGQGQFGTTFLCVEKGTNKDFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLIVSVVEACHSLGVMHRDLKPENFLFINHEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKQYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLRGELDFVSEPWPSISESAKDLVRRMLIRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLTRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFKMIDTDNSGQITLEELKNGLERVGSVLKDSEINWLMQAADVDNSGTIDYGEFIAAMLHLNKIQKEDHLFAAFSYFDKDGSGYITKDELQQACEQFGLKDYHLDDIIREVDRDNVIYCIPVVYYDGRIDYSEFVAMMEDTGFGRKGL. | 615 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g05173 | 614 | Pfam | EF-hand domain pair | 464 | 524 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | Pfam | EF-hand domain pair | 534 | 604 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | MobiDBLite | consensus disorder prediction | 91 | 115 | - | - | |
Seca7g05173 | 614 | ProSitePatterns | Protein kinases ATP-binding region signature. | 164 | 191 | IPR017441 | GO:0005524 | |
Seca7g05173 | 614 | Gene3D | - | 423 | 607 | - | - | |
Seca7g05173 | 614 | MobiDBLite | consensus disorder prediction | 47 | 78 | - | - | |
Seca7g05173 | 614 | CDD | STKc_CAMK | 157 | 415 | - | - | |
Seca7g05173 | 614 | SUPERFAMILY | Protein kinase-like (PK-like) | 156 | 417 | IPR011009 | - | |
Seca7g05173 | 614 | ProSitePatterns | EF-hand calcium-binding domain. | 544 | 556 | IPR018247 | - | |
Seca7g05173 | 614 | FunFam | Calcium-dependent protein kinase SK5 | 244 | 428 | - | - | |
Seca7g05173 | 614 | SUPERFAMILY | EF-hand | 456 | 604 | IPR011992 | - | |
Seca7g05173 | 614 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 531 | 566 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | Gene3D | Phosphorylase Kinase; domain 1 | 160 | 243 | - | - | |
Seca7g05173 | 614 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 495 | 530 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 150 | 582 | - | - | |
Seca7g05173 | 614 | FunFam | Calcium-dependent protein kinase 1 | 160 | 243 | - | - | |
Seca7g05173 | 614 | ProSiteProfiles | Protein kinase domain profile. | 158 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05173 | 614 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 459 | 494 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | Pfam | Protein kinase domain | 158 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g05173 | 614 | FunFam | Calcium-dependent protein kinase 1 | 424 | 608 | - | - | |
Seca7g05173 | 614 | Gene3D | Transferase(Phosphotransferase) domain 1 | 244 | 420 | - | - | |
Seca7g05173 | 614 | ProSitePatterns | EF-hand calcium-binding domain. | 472 | 484 | IPR018247 | - | |
Seca7g05173 | 614 | SMART | efh_1 | 499 | 527 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | SMART | efh_1 | 463 | 491 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | SMART | efh_1 | 535 | 563 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | SMART | efh_1 | 569 | 607 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | MobiDBLite | consensus disorder prediction | 26 | 133 | - | - | |
Seca7g05173 | 614 | ProSitePatterns | EF-hand calcium-binding domain. | 508 | 520 | IPR018247 | - | |
Seca7g05173 | 614 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 278 | 290 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g05173 | 614 | CDD | EFh | 464 | 524 | IPR002048 | GO:0005509 | |
Seca7g05173 | 614 | SMART | serkin_6 | 158 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g05173 | Seca-Chr7 | 149312209 | 149318505 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g05173 | 1 | 614 | EF-hand Containing Proteins | AT2G38910 | 73.258 | 0.0 | 907 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Seca7g05173 | Pkinase | 1.1e-74 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g05173 | K13412 | - | gmx:100813232 | 993.416 |