Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05172 ATGAGGTTCTCTGTTTCCTCTCTTCTCACTGAACTGAGGCTGACCCATTTGGCTAACACAAGGCTTGCTCATGGCCTATCTGGTGGAGAACATAGAAGGGTCTCCATTGGTTTGAGTCTCCTTCATGATCCTGCTGTTTTGCTCCTTGATGAACCCACTTCTGGTCTTGACAGTACCTCTGCTTTCAAAGTCATGCAAATTCTCAAATCAACTTGTGTTTCTAAAATAACATGA 234 0.4359 MRFSVSSLLTELRLTHLANTRLAHGLSGGEHRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSTCVSKIT. 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05172 77 Pfam ABC transporter 6 54 IPR003439 GO:0005524
Seca7g05172 77 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 71 IPR027417 -
Seca7g05172 77 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 71 - -
Seca7g05172 77 Gene3D - 2 77 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05172 Seca-Chr7 149305871 149306104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05172 26 77 Calmodulin-binding Proteins AT2G36910 44.231 2.59e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05172 K05681 - gmx:100790712 124.02