LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g05155	ATGGAGTTTTGGTTTTTTTGTAATTGTGTTATTCAATTTATTCTCATTTTGATTTCTTGCTTCGGTTATCAGGTTAATGACATTTCCCTGGCTGATTATATTGGAGTGGTGGCATCCAAGCATGCCACCTATGTTCCTCACACTGCTGGTAGGTACTCTGTCAAGCGGTTCAGGAAAGCCCAGTGCCCCATTGTTGAGAGGCTCACCAACTCTCTCATGATGCACGGTAGAAATAATGGCAAGAAACTTATGGCCGTTAGGATCATCAAGCATGCCATGGAAATTATTCATTTGTTGACTGACCAGAACCCTATTCAGGTCATTGTTGATGCTGTCATCAACAGGTATGCACTGATGCTGGATAAAGGATTCTCGTATTTTTTATTGTTTATGTGTAGTTTGTGGCTATGCCTTCTATAG	420	0.4095	MEFWFFCNCVIQFILILISCFGYQVNDISLADYIGVVASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINRYALMLDKGFSYFLLFMCSLWLCLL.	140

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g05155	139	Gene3D	Ribosomal protein S7 domain	17	119	IPR036823	-
	Seca7g05155	139	Pfam	Ribosomal protein S7p/S5e	54	114	IPR023798	-
	Seca7g05155	139	ProSitePatterns	Ribosomal protein S7 signature.	66	92	IPR020606	GO:0003723\|GO:0003735\|GO:0006412
	Seca7g05155	139	SUPERFAMILY	Ribosomal protein S7	22	117	IPR036823	-
	Seca7g05155	139	PANTHER	RIBOSOMAL PROTEIN S7	24	115	IPR000235	GO:0006412

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g05155	Seca-Chr7	149012232	149014172	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca7g05155	25	114	Cytoplasmic Ribosomal Protein Gene Family	AT3G11940	87.778	1.65e-56	173

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g05155	K02989		-	cit:102622374	177.948

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