Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g05154 ATGTTCTTCCAATTGCTATGGCTTCCTGAGAACCATATTTTAATGAACGTGAAGCCAGTTTTTGATGCAGCCATAAGAGTTGTCCTTCAACCACCAAAGCAAAAGAAAAAGAAGGGTAAAGGACAAAAGGCCTTAGATTACTGCCATTCTCAGGGCATAATGCATAGAGATGTCAAGCCCCATAATGTTATGAATTATGATAGATCATGA 210 0.3857 MFFQLLWLPENHILMNVKPVFDAAIRVVLQPPKQKKKKGKGQKALDYCHSQGIMHRDVKPHNVMNYDRS. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g05154 69 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g05154 69 SUPERFAMILY Protein kinase-like (PK-like) 43 65 IPR011009 -
Seca7g05154 69 Gene3D Transferase(Phosphotransferase) domain 1 43 64 - -
Seca7g05154 69 Pfam Protein kinase domain 42 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g05154 Seca-Chr7 149002334 149003696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g05154 33 64 CBL-interacting serine-threonine protein kinases AT5G57630 41.026 3.02e-06 40.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Seca7g05154 Pkinase 3.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g05154 K03097 - gmx:100776388 52.7582